Sequences for SCOMX31538

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SCOMX31538 (A0A2U9BRD0)

E Scophthalmus maximus | Transcription factor MafG [MAFG]

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Orthologs 179

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 139
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	SCOMX31539	208			3	A0A2U9BRD0
	SCOMX31538 reference isoform	171			2	A0A2U9BRD0

Protein Sequence

Download: Fasta

MTTTNKGNKA LKVKREPGEN GTSLTDDELV TMSVRELNQH LRGLTKEEIL QLKQRRRTLK    60
NRGYAASCRV KRVTQKEELE KQKAKLQQEV DKLANENASM RVELDALRSK YEALQTFART   120
VSRSPTVGVG VRAGGGGGGV ASSVIGPLIP GKVATATSVI TIVKSKTDAR S            171

cDNA Sequence

Download: Fasta

ATGACGACGA CTAACAAAGG AAATAAAGCC TTGAAGGTGA AGCGTGAGCC GGGGGAGAAT    60
GGCACCAGCC TCACAGACGA CGAGCTGGTG ACCATGTCAG TGCGGGAGCT GAACCAGCAC   120
CTCCGGGGGC TCACCAAAGA AGAGATCCTG CAGCTGAAGC AGCGGCGGCG CACCCTGAAG   180
AACCGGGGCT ACGCCGCCAG CTGCCGGGTG AAGCGAGTCA CCCAGAAGGA GGAGCTGGAG   240
AAGCAGAAGG CAAAGCTGCA GCAGGAGGTG GACAAATTGG CCAATGAGAA CGCCTCAATG   300
CGCGTGGAGC TGGACGCTCT GAGGTCTAAG TACGAGGCTT TACAGACCTT CGCGAGGACT   360
GTGTCACGGA GCCCCACTGT CGGGGTCGGC GTCAGGGCTG GAGGGGGCGG AGGAGGTGTG   420
GCATCATCGG TCATCGGTCC GCTAATACCA GGGAAGGTGG CAACGGCGAC GAGTGTGATC   480
ACAATAGTGA AGTCAAAAAC AGACGCCCGG TCTTGA                             516