Sequences for SARHA07002

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SARHA07002 (ENSSHAG00000003575)

E Sarcophilus harrisii

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Orthologs 492

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 429
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	SARHA07002 reference isoform	268			5	ENSSHAG00000003575

Protein Sequence

Download: Fasta

AEVSFLQMLG SLVLAGALLL LLLAWRNRDL LVLLWHDRVA LCVANFFSGM SKEERILNWV    60
KQRATAGDPE SVLGAIDQYC YQKEWAMNVG DTKGLIVDKV VEEVKPKVLL ELGTYCGYSA   120
VRMGRLLPPG GHLFTIEFNE SFAAIAQQII QLAGLQEKIS ILKGPTEEII PQLKKKYEIN   180
TVDMVFLDHW KDRYLPDTRL LEESGLLRKG SVLLADNVIL PGAPEFLQYI RNHKGFECTH   240
YPSMLEYLPM KDGLEKAVFR GPGAPIQG                                      268

cDNA Sequence

Download: Fasta

GCTGAGGTGT CCTTTCTGCA GATGCTGGGG AGCCTCGTGC TGGCCGGGGC CCTGCTGCTG    60
CTGCTGCTGG CCTGGAGAAA CCGGGACCTG CTGGTCCTGC TCTGGCACGA CCGCGTCGCC   120
CTGTGTGTCG CCAACTTCTT CTCGGGCATG AGCAAGGAGG AGAGGATCCT GAACTGGGTC   180
AAGCAGCGGG CGACTGCGGG CGACCCCGAG AGCGTGCTGG GTGCCATCGA CCAGTACTGC   240
TACCAGAAGG AGTGGGCCAT GAACGTGGGC GATACCAAAG GGCTGATCGT GGACAAGGTG   300
GTGGAGGAAG TGAAGCCCAA GGTCCTGCTG GAGCTGGGAA CCTACTGCGG CTACTCGGCC   360
GTGAGGATGG GCCGCCTGCT GCCCCCCGGC GGGCACCTCT TCACCATCGA GTTCAATGAG   420
AGCTTCGCGG CCATCGCCCA GCAGATCATC CAGCTGGCCG GCCTGCAAGA GAAGATTTCC   480
ATCCTGAAAG GGCCCACAGA GGAAATCATC CCCCAGCTCA AAAAGAAGTA CGAGATCAAT   540
ACGGTCGATA TGGTCTTCCT GGACCACTGG AAGGACCGTT ACCTTCCGGA CACCAGGCTG   600
CTGGAGGAGA GCGGCCTGCT TCGGAAGGGC TCGGTGCTCC TGGCCGACAA CGTCATCCTC   660
CCCGGGGCGC CCGAATTTCT CCAGTACATC CGGAACCACA AAGGCTTTGA GTGCACCCAC   720
TACCCCTCCA TGCTGGAGTA CCTGCCCATG AAGGACGGAT TGGAGAAGGC CGTGTTCCGA   780
GGCCCCGGGG CCCCCATTCA AGGCNNN                                       807