Sequences for SAIBB23861

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
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HOGs	hog, sequence
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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SAIBB23861 (A0A2K6SFI5)

E Saimiri boliviensis boliviensis | NKG2-D type II integral membrane protein [KLRK1]

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Orthologs 88

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 3
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	SAIBB23860	217			7	A0A2K6SFF6
	SAIBB23861 reference isoform	185			6	A0A2K6SFI5

Protein Sequence

Download: Fasta

MGWIRGRRPR HRLAMSEFHN YNLELAKSDF STRWHKQRCP VIKSKCRENS LFNQEVQVPL    60
TESYCGPCPK NWICYRNNCY QFFNENKNWY ESQASCISQN ASLLKVYSKA EQDFLKLVKS   120
YHWMGLVYIP TNGSWQWEDG TILSPNLLTI IEMQKGDCAV YASSFKGYTE NCSSPNTYIC   180
MQKTA                                                               185

cDNA Sequence

Download: Fasta

ATGGGGTGGA TTCGTGGTCG GAGGCCTCGT CACAGATTGG CGATGAGTGA ATTTCATAAT    60
TATAACTTGG AGCTAGCGAA AAGTGATTTT TCAACACGAT GGCACAAGCA AAGATGTCCA   120
GTAATCAAAA GCAAATGTAG AGAAAACTCA TTATTCAACC AAGAAGTTCA AGTTCCCTTG   180
ACCGAAAGTT ACTGTGGCCC ATGTCCTAAA AACTGGATAT GTTATAGAAA TAACTGCTAC   240
CAATTTTTTA ATGAGAATAA AAACTGGTAT GAGAGCCAGG CTTCTTGTAT ATCTCAAAAT   300
GCCAGCCTTC TGAAAGTATA CAGCAAAGCG GAACAGGATT TCCTTAAACT GGTGAAGTCA   360
TATCACTGGA TGGGACTAGT ATATATTCCA ACAAATGGAT CTTGGCAGTG GGAAGATGGC   420
ACCATTCTCT CACCCAACCT ACTAACAATA ATTGAAATGC AGAAGGGAGA CTGCGCAGTC   480
TACGCCTCAA GCTTTAAAGG CTACACAGAA AACTGTTCAA GTCCAAATAC ATACATCTGT   540
ATGCAGAAGA CTGCGTAG                                                 558