Sequences for RHIRO31330

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RHIRO31330 (A0A2K6NJK3)

E Rhinopithecus roxellana | Dehydrogenase/reductase SDR family member 6 [BDH2]

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Orthologs 20935

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 9554
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	RHIRO31331	95			4	A0A2K6NJM6
	RHIRO31330 reference isoform	245			9	A0A2K6NJK3

Protein Sequence

Download: Fasta

MGRLDGKVII LTAAAQGIGQ AAALAFAREG AKVIATDINE SKLQELEKYP GIQTRVLDVT    60
KKKQIDQFAN EVERLDVLFN VAGFVHHGTV LDCGEKDWDF SMNLNVRSMY LMIKAFLPKM   120
LAQKSGNIIN MSSVASSIKG VVNRCVYSTT KAAVIGLTKS VAADFIQQGI RCNCVCPGTV   180
DTPSLQERIQ ARGNPEEARN DFLKRQKTGR FATAEEIAML CVYLASDESA YVTGNPVIID   240
GGWSL                                                               245

cDNA Sequence

Download: Fasta

ATGGGTCGAC TTGATGGGAA AGTCATCATC CTGACAGCCG CTGCTCAGGG GATTGGCCAA    60
GCAGCTGCCT TAGCTTTTGC AAGAGAAGGT GCCAAAGTCA TAGCCACAGA CATTAATGAG   120
TCCAAGCTTC AGGAACTGGA AAAGTACCCG GGCATTCAAA CTCGTGTCCT TGATGTCACA   180
AAGAAGAAAC AAATTGATCA GTTTGCCAAT GAAGTTGAGA GACTTGATGT TCTCTTTAAT   240
GTTGCTGGTT TTGTCCATCA TGGAACAGTC CTGGATTGTG GGGAGAAAGA CTGGGACTTC   300
TCGATGAATC TCAATGTGCG CAGCATGTAC CTGATGATCA AGGCATTCCT TCCTAAAATG   360
CTTGCTCAGA AATCTGGCAA TATTATCAAC ATGTCTTCTG TGGCTTCCAG CATCAAAGGA   420
GTTGTGAACA GATGTGTATA CAGCACAACC AAGGCAGCCG TGATTGGCCT CACAAAATCT   480
GTGGCTGCAG ATTTCATCCA GCAGGGCATC AGGTGCAACT GCGTGTGCCC AGGAACGGTT   540
GATACCCCAT CTCTACAAGA AAGAATACAA GCCAGAGGAA ATCCTGAAGA GGCACGGAAT   600
GATTTCCTGA AGAGACAAAA GACGGGAAGA TTTGCAACTG CAGAAGAAAT AGCCATGCTC   660
TGCGTGTATT TGGCTTCTGA TGAATCTGCT TATGTAACTG GTAACCCTGT CATCATTGAT   720
GGAGGCTGGA GCTTGTGA                                                 738