Sequences for RHIFE07577

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Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RHIFE07577 (A0A671EXG2)

E Rhinolophus ferrumequinum | Mannose-P-dolichol utilization defect 1 protein [MPDU1]

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Orthologs 743

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 374
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	RHIFE07577 reference isoform	247			7	A0A671EXG2

Protein Sequence

Download: Fasta

MAAEADGPIK RVLVPLLLPE KCYDQIFVQW DLLHVPCLKI LLSKGLGLGI VAGSLLVKLP    60
QVFKILGAKS AEGLSLQSVM LELVALTGTM VYSIINNFPF SSWGEALFLM LQTVTICFLV   120
LHYRGQTVKG VAFLACYALV LLVLLSPLTP MAVVTLLQAS NVPAVVVGKL LQAATNYHNG   180
HTGQLSAITV FLLFGGSLAR IFTSIQETGD LLMAGTFVVS SLCNGLIAAQ LLFYWNAKAP   240
HKKKKEQ                                                             247

cDNA Sequence

Download: Fasta

ATGGCGGCGG AGGCTGACGG GCCGATCAAA CGGGTGCTGG TTCCGCTTCT TTTACCTGAG    60
AAATGCTACG ACCAAATTTT CGTCCAGTGG GACTTGCTGC ACGTCCCCTG CCTCAAGATT   120
CTCCTCAGCA AAGGCCTGGG GCTGGGCATT GTAGCTGGGT CACTTCTGGT AAAATTGCCC   180
CAGGTGTTTA AAATCCTTGG AGCCAAGAGT GCCGAAGGGC TGAGCCTCCA GTCAGTAATG   240
CTGGAACTAG TGGCATTGAC TGGGACCATG GTCTACAGCA TCATCAACAA CTTCCCCTTC   300
AGCTCTTGGG GTGAAGCCCT GTTCCTGATG CTCCAGACAG TCACCATCTG CTTCCTGGTC   360
CTGCACTACA GAGGACAGAC TGTGAAAGGT GTCGCTTTCC TAGCGTGTTA TGCCCTGGTC   420
CTGCTGGTGC TGCTTTCACC ACTGACGCCC ATGGCTGTAG TCACCCTGCT CCAGGCCTCC   480
AATGTGCCTG CTGTGGTGGT GGGGAAGCTG CTGCAGGCAG CCACCAATTA CCACAACGGA   540
CACACGGGCC AGCTCTCAGC CATCACAGTC TTTTTGCTCT TTGGGGGCTC CCTGGCGCGA   600
ATCTTCACTT CCATTCAGGA AACTGGAGAC CTCCTCATGG CTGGAACCTT TGTGGTCTCT   660
TCTCTCTGCA ACGGCCTCAT TGCTGCCCAG CTTCTCTTCT ACTGGAATGC AAAGGCACCC   720
CACAAGAAGA AAAAGGAGCA GTAG                                          744