Sequences for RHIBE24078

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RHIBE24078 (A0A2K6MWN9)

E Rhinopithecus bieti | RAB40C, member RAS oncogene family [RAB40C]

‹

Orthologs 286

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 214
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	RHIBE24078 reference isoform	281			6	A0A2K6MWN9

Protein Sequence

Download: Fasta

MGSQGSPVKS YDYLLKFLLV GDSDVGKGEI LESLQDGAAE SPYAYSNGID YKTTTILLDG    60
RRVKLELWDT SGQGRFCTIF RSYSRGAQGI LLVYDITNRW SFDGIDRWIK EIDEHAPGVP   120
RILVGNRLHL AFKRQVPTEQ ARAYAEKNCM TFFEVSPLCN FNVIESFTEL SRIVLMRHGM   180
EKIWRPNRVF SLQDLCCRAI VSCTPVHLID KLPLPVTIKS HLKSFSMANG MNAVMMHGRS   240
YSLAGGAGGG GSKGSSLKRS RSIRPPQSPP QNCSRSNCKI S                       281

cDNA Sequence

Download: Fasta

ATGGGCTCGC AGGGCAGCCC GGTGAAGAGC TACGACTACC TGCTCAAGTT CCTGCTGGTG    60
GGCGACAGCG ACGTGGGCAA GGGCGAGATC CTGGAGAGCC TGCAGGACGG CGCGGCCGAG   120
TCCCCGTACG CCTACAGTAA CGGGATTGAC TACAAGACCA CCACCATCCT GCTGGACGGC   180
CGGCGTGTGA AGCTGGAGCT CTGGGACACA TCGGGCCAGG GCCGGTTCTG CACCATCTTC   240
AGGTCCTACT CCAGAGGCGC CCAGGGGATC CTTCTGGTGT ATGACATCAC CAACCGCTGG   300
TCCTTTGACG GCATCGACCG CTGGATCAAG GAGATCGATG AGCATGCACC CGGAGTCCCC   360
CGGATCTTGG TTGGAAACCG GCTGCACCTG GCCTTCAAGC GGCAGGTCCC GACGGAGCAG   420
GCCCGTGCAT ATGCAGAGAA GAACTGCATG ACCTTCTTTG AGGTCAGCCC CCTGTGCAAC   480
TTCAATGTCA TTGAGTCCTT CACGGAGCTG TCCCGCATCG TGCTCATGCG GCATGGCATG   540
GAGAAGATCT GGAGGCCGAA CCGAGTGTTC AGCCTGCAGG ATCTCTGCTG CCGGGCCATC   600
GTCTCCTGCA CCCCCGTGCA CCTCATCGAC AAGCTTCCAC TGCCCGTCAC CATCAAGAGC   660
CACCTCAAGT CCTTCTCGAT GGCCAACGGC ATGAACGCGG TCATGATGCA CGGCCGCTCC   720
TACTCCCTGG CCGGCGGGGC CGGCGGCGGC GGCAGCAAGG GCAGCAGCCT CAAGAGATCC   780
AGGTCCATCC GCCCGCCCCA GAGCCCCCCG CAGAACTGCT CGCGGAGCAA CTGCAAGATC   840
TCCTAG                                                              846