E Rattus norvegicus | Collagen type II alpha 1 chain [Col2a1]
Protein ID | Sequence length | Exons | Domain Architectures | Number exons | Cross reference | |
---|---|---|---|---|---|---|
RATNO38552 reference isoform | 1487 | 54 | ![]() | |||
RATNO38551 | 1419 | 53 | ![]() |
MIRLGAPQSL VLLTLLIATV LQCQGQDAQE AGSCLQNGQR YKDKDVWKPS SCRICVCDTG 60 NVLCDDIICE DPDCLNPEIP FGECCPICPA DLATASGKLG PKGQKGEPGD IKDIIGPKGP 120 PGPQGPAGEQ GPRGDRGDKG ERGAPGPRGR DGEPGTPGNP GPPGPPGPPG PPGLGGGNFA 180 AQMAGGFDEK AGGAQMGVMQ GPMGPMGPRG PPGPAGAPGP QGFQGNPGEP GEPGVSGPMG 240 PRGPPGPAGK PGDDGEAGKP GKAGERGLPG PQGARGFPGT PGLPGVKGHR GYPGLDGAKG 300 EAGAPGVKGE SGSPGENGSP GPMGPRGLPG ERGRTGPAGA AGARGNDGQP GPAGPPGPVG 360 PAGGPGFPGA PGAKGEAGPT GARGPEGAQG SRGEPGNPGS PGPAGASGNP GTDGIPGAKG 420 SAGAPGIAGA PGFPGPRGPP GPQGATGPLG PKGQTGEPGI AGFKGEQGPK GETGPAGPQG 480 APGPAGEEGK RGARGEPGGA GPIGPPGERG APGNRGFPGQ DGLAGPKGAP GERGPSGLAG 540 PKGANGDPGR PGEPGLPGAR GLTGRPGDAG PQGKVGPSGA PGEDGRPGPP GPQGARGQPG 600 VMGFPGPKGA NGEPGKAGEK GLAGAPGLRG LPGKDGETGA AGPPGPSGPA GERGEQGAPG 660 PSGFQGLPGP PGPPGEGGKQ GDQGIPGEAG APGLVGPRGE RGFPGERGSP GAQGLQGPRG 720 LPGTPGTDGP KGAAGPDGPP GAQGPPGLQG MPGERGAAGI AGPKGDRGDV GEKGPEGAPG 780 KDGGRGLTGP IGPPGPAGAN GEKGEVGPPG PSGSTGARGA PGERGETGPP GPAGFAGPPG 840 ADGQPGAKGD QGEAGQKGDA GAPGPQGPSG APGPQGPTGV TGPKGARGAQ GPPGATGFPG 900 AAGRVGPPGS NGNPGPAGPP GPAGKDGPKG ARGDTGAPGR AGDPGLQGPA GAPGEKGEPG 960 DDGPSGSDGP PGPQGLAGQR GIVGLPGQRG ERGFPGLPGP SGEPGKQGAP GASGDRGPPG 1020 PVGPPGLTGP AGEPGREGSP GADGPPGRDG AAGVKGDRGE TGALGAPGAP GPPGSPGPAG 1080 PTGKQGDRGE AGAQGPMGPS GPAGARGIAG PQGPRGDKGE AGEPGERGLK GHRGFTGLQG 1140 LPGPPGPSGD QGTSGPAGPS GPRGPPGPVG PSGKDGSNGI PGPIGPPGPR GRSGETGPAG 1200 PPGNPGPPGP PGPPGPGIDM SAFAGLGQRE KGPDPLQYMR ADEADSTLRQ HDVEVDATLK 1260 SLNNQIESIR SPDGSRKNPA RTCQDLKLCH PEWKSGDYWI DPNQGCTLDA MKVFCNMETG 1320 ETCVYPNPAT VPRKNWWSSK SKEKKHIWFG ETMNGGFHFS YGDGNLAPNT ANVQMTFLRL 1380 LSTEGSQNIT YHCKNSIAYL DEAAGNLKKA LLIQGSNDVE MRAEGNSRFT YTALKDGCTK 1440 HTGKWGKTII EYRSQKTSRL PIVDIAPMDI GGPDQEFGVD IGPVCFL 1487
ATGATCCGCC TCGGGGCTCC CCAGTCGCTG GTGCTGCTGA CGCTGCTCAT CGCCACGGTC 60 CTACAATGTC AGGGCCAGGA TGCCCAGGAG GCTGGCAGCT GTCTGCAGAA TGGGCAGAGG 120 TATAAAGATA AGGATGTATG GAAGCCCTCG TCCTGCCGCA TCTGTGTGTG TGACACTGGG 180 AATGTCCTCT GCGATGACAT AATCTGTGAA GACCCAGACT GCCTCAACCC CGAGATCCCC 240 TTCGGAGAGT GCTGTCCCAT CTGCCCAGCT GACCTCGCCA CTGCCAGTGG AAAATTAGGG 300 CCAAAGGGGC AGAAAGGAGA ACCTGGAGAT ATCAAAGATA TCATAGGACC TAAAGGACCT 360 CCTGGCCCTC AGGGACCTGC CGGTGAACAA GGACCCAGAG GTGACCGTGG TGACAAGGGA 420 GAGAGGGGTG CACCTGGACC CCGTGGCAGA GATGGAGAAC CTGGTACCCC TGGAAATCCT 480 GGTCCCCCTG GCCCTCCAGG CCCCCCTGGT CCCCCTGGCC TTGGTGGAGG AAACTTTGCA 540 GCCCAGATGG CTGGAGGATT TGACGAGAAG GCTGGTGGTG CCCAGATGGG AGTCATGCAA 600 GGCCCCATGG GCCCCATGGG ACCTCGTGGA CCCCCAGGCC CCGCCGGTGC CCCCGGCCCT 660 CAAGGATTTC AAGGCAATCC TGGTGAACCT GGCGAGCCTG GTGTCTCTGG TCCCATGGGT 720 CCCCGAGGTC CTCCAGGTCC TGCTGGAAAA CCTGGTGATG ATGGTGAAGC TGGAAAGCCC 780 GGAAAGGCCG GAGAAAGAGG CCTCCCTGGT CCTCAGGGTG CTCGTGGATT CCCGGGAACC 840 CCCGGTCTTC CTGGTGTCAA GGGTCACAGA GGTTACCCAG GCCTCGATGG TGCTAAGGGA 900 GAAGCTGGTG CTCCAGGTGT GAAGGGTGAG AGCGGTTCCC CTGGTGAGAA CGGATCCCCA 960 GGCCCAATGG GTCCCCGTGG CCTGCCTGGC GAGAGAGGAC GGACTGGCCC TGCTGGTGCT 1020 GCTGGTGCTC GAGGCAACGA CGGCCAGCCA GGCCCTGCTG GACCTCCGGG TCCTGTTGGT 1080 CCTGCAGGTG GTCCTGGCTT CCCTGGTGCT CCTGGTGCCA AGGGCGAAGC TGGTCCCACT 1140 GGTGCCCGTG GTCCTGAAGG TGCTCAAGGT TCTCGTGGCG AACCCGGCAA TCCCGGATCC 1200 CCCGGGCCCG CAGGCGCTTC TGGTAACCCA GGGACTGATG GTATTCCCGG AGCCAAAGGA 1260 TCTGCTGGCG CTCCTGGAAT TGCTGGTGCC CCTGGCTTCC CTGGGCCCCG TGGCCCTCCC 1320 GGTCCTCAAG GTGCAACTGG TCCTCTGGGC CCCAAAGGTC AGACGGGTGA GCCCGGCATC 1380 GCTGGCTTCA AAGGTGAACA AGGCCCCAAG GGAGAGACTG GACCTGCTGG GCCCCAGGGA 1440 GCCCCTGGCC CTGCTGGTGA AGAAGGAAAA CGAGGTGCTC GAGGAGAGCC CGGTGGCGCT 1500 GGACCTATCG GCCCCCCTGG AGAGAGAGGT GCTCCTGGCA ACCGTGGTTT CCCAGGTCAA 1560 GATGGTCTGG CAGGTCCCAA GGGTGCCCCT GGAGAGCGAG GGCCTAGTGG CCTGGCTGGT 1620 CCTAAGGGTG CCAATGGTGA CCCGGGTCGT CCTGGAGAAC CTGGTCTTCC TGGAGCCAGG 1680 GGTCTTACTG GCCGCCCTGG TGATGCTGGT CCTCAAGGCA AAGTTGGTCC TTCTGGAGCC 1740 CCTGGAGAAG ACGGTCGCCC TGGTCCTCCT GGTCCTCAGG GAGCTCGTGG GCAGCCTGGC 1800 GTCATGGGTT TCCCTGGCCC CAAAGGAGCC AATGGCGAGC CTGGCAAAGC TGGTGAGAAA 1860 GGACTGGCTG GTGCTCCTGG TCTGAGAGGT CTTCCTGGCA AAGATGGTGA GACAGGAGCC 1920 GCAGGACCCC CCGGCCCCAG CGGACCTGCT GGTGAACGAG GCGAGCAGGG TGCTCCTGGG 1980 CCATCAGGGT TCCAGGGACT TCCTGGCCCT CCTGGTCCCC CGGGTGAAGG TGGAAAGCAA 2040 GGTGACCAGG GTATTCCTGG TGAAGCTGGA GCCCCTGGCC TCGTTGGTCC CCGGGGTGAA 2100 CGAGGTTTCC CAGGTGAACG TGGCTCTCCC GGTGCTCAGG GCCTCCAGGG TCCCCGAGGC 2160 CTCCCTGGCA CTCCTGGTAC TGATGGTCCC AAAGGTGCGG CTGGCCCAGA TGGTCCCCCT 2220 GGGGCTCAGG GCCCTCCAGG TCTACAGGGA ATGCCTGGTG AGAGGGGAGC AGCTGGTATT 2280 GCTGGACCCA AGGGAGACAG AGGTGATGTT GGCGAGAAAG GCCCAGAGGG AGCTCCTGGA 2340 AAAGATGGTG GCCGAGGTCT TACTGGGCCC ATCGGGCCCC CAGGACCAGC AGGTGCCAAT 2400 GGCGAGAAGG GAGAAGTCGG ACCTCCTGGT CCTTCAGGAA GTACTGGAGC TCGAGGCGCC 2460 CCGGGTGAGC GCGGAGAGAC TGGGCCACCT GGACCTGCTG GATTCGCTGG CCCTCCTGGT 2520 GCTGATGGCC AGCCTGGTGC CAAGGGCGAT CAAGGAGAAG CTGGACAGAA AGGTGACGCT 2580 GGTGCCCCTG GCCCACAAGG CCCCTCAGGA GCTCCCGGGC CACAGGGTCC TACTGGAGTG 2640 ACTGGTCCTA AGGGAGCCCG GGGCGCCCAA GGCCCACCGG GAGCCACCGG ATTCCCTGGA 2700 GCTGCTGGCC GAGTTGGACC CCCAGGTTCT AATGGCAACC CTGGGCCCGC CGGTCCCCCT 2760 GGTCCTGCTG GAAAAGATGG TCCCAAAGGT GCTCGAGGAG ACACTGGTGC CCCTGGCAGA 2820 GCTGGTGACC CTGGACTTCA AGGACCCGCA GGAGCTCCTG GAGAGAAAGG CGAACCTGGA 2880 GATGACGGTC CCTCTGGTTC TGATGGTCCC CCAGGTCCCC AGGGGCTGGC TGGTCAAAGG 2940 GGCATTGTTG GTCTGCCTGG TCAGCGTGGT GAGAGAGGAT TCCCAGGCCT TCCCGGCCCA 3000 TCGGGTGAGC CCGGCAAGCA GGGTGCACCT GGTGCATCTG GAGACAGAGG TCCTCCTGGT 3060 CCTGTGGGGC CTCCTGGCTT GACAGGACCT GCAGGTGAAC CTGGACGAGA GGGCAGCCCT 3120 GGTGCTGATG GACCCCCTGG CAGAGATGGT GCGGCTGGAG TCAAGGGTGA TCGTGGTGAG 3180 ACTGGTGCAC TTGGTGCTCC TGGAGCTCCT GGGCCCCCAG GCTCTCCTGG TCCTGCTGGC 3240 CCAACTGGCA AACAAGGAGA CAGAGGAGAG GCTGGTGCAC AAGGTCCTAT GGGCCCCTCA 3300 GGACCTGCTG GAGCCCGTGG AATTGCTGGC CCTCAAGGCC CCCGAGGTGA CAAAGGAGAA 3360 GCTGGAGAGC CTGGCGAGAG AGGACTGAAG GGGCACCGAG GTTTCACTGG ACTGCAGGGT 3420 CTGCCTGGCC CCCCGGGTCC TTCTGGAGAT CAGGGTACTT CTGGCCCTGC TGGTCCTTCC 3480 GGCCCTAGAG GTCCACCTGG CCCTGTTGGT CCCTCTGGCA AAGATGGCTC TAATGGAATC 3540 CCTGGCCCCA TCGGGCCTCC AGGTCCCCGT GGACGCTCAG GAGAAACTGG CCCTGCTGGT 3600 CCTCCTGGAA ATCCTGGTCC CCCTGGCCCT CCGGGTCCTC CTGGTCCTGG CATCGACATG 3660 TCAGCCTTTG CTGGCTTAGG ACAGAGAGAG AAGGGCCCCG ATCCCCTGCA GTACATGCGG 3720 GCCGACGAGG CAGACAGTAC CTTGAGACAG CATGACGTCG AGGTGGACGC CACGCTCAAG 3780 TCGCTGAACA ACCAGATCGA GAGCATCCGC AGCCCTGATG GCTCCCGCAA GAATCCCGCT 3840 CGCACCTGCC AGGACCTGAA ACTCTGCCAC CCAGAGTGGA AGAGCGGAGA CTACTGGATT 3900 GATCCCAACC AGGGCTGCAC CTTGGACGCC ATGAAAGTCT TCTGCAACAT GGAGACTGGC 3960 GAGACTTGCG TCTACCCCAA CCCAGCGACT GTGCCTCGGA AGAACTGGTG GAGCAGCAAG 4020 AGCAAGGAGA AGAAGCACAT CTGGTTTGGA GAGACCATGA ACGGCGGCTT CCACTTCAGC 4080 TACGGCGACG GCAACCTGGC TCCCAACACC GCTAACGTCC AGATGACTTT CCTCCGTCTA 4140 CTGTCCACTG AGGGCTCCCA GAACATCACC TACCACTGTA AGAACAGCAT TGCCTACCTG 4200 GACGAAGCAG CCGGCAACCT CAAGAAGGCC TTGCTCATCC AGGGCTCCAA TGATGTGGAG 4260 ATGAGGGCCG AGGGCAACAG CAGGTTCACG TACACTGCCC TGAAGGATGG CTGCACGAAA 4320 CACACCGGTA AGTGGGGCAA GACCATCATC GAGTACCGAT CACAGAAGAC CTCACGCCTT 4380 CCCATTGTTG ACATTGCACC CATGGACATC GGAGGGCCTG ATCAGGAATT TGGTGTGGAC 4440 ATAGGGCCTG TCTGTTTCTT GTAA 4464