Sequences for RATNO31324

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO31324 (Q6XZ77)

E Rattus norvegicus | Killer cell lectin like receptor C3 [Klrc3]

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Orthologs 156

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 57
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	RATNO31325	221			5	A0A8I5ZN10
	RATNO31324 reference isoform	230			6	Q6XZ77

Protein Sequence

Download: Fasta

MSHLLRTESA SEPRKSTKKT QSQLHFSNRA GDHLLEFSFQ HASQKHLKIS RQGYCKNFSS    60
PPEKLISGIL GIIWFALLIT LVFSTRIVSS YTEQKKQIHS LLNRTQKARP CTRCPDDWMS   120
YSHNCYYISV ERKSWNDGLT SCVSKNCSLL HIDSEEEQAF LQSFSLVSWT GFFRKSRSQP   180
WVWENGSTFK PKITEMLHDE YNCIMMSTSG LTAENCTTLH PYVCKCKFTN              230

cDNA Sequence

Download: Fasta

ATGAGTCACC TGCTCAGAAC TGAAAGTGCC TCAGAACCCA GGAAATCCAC AAAGAAAACC    60
CAGTCGCAGC TCCATTTCAG TAATCGAGCA GGAGATCACC TGCTGGAATT TAGCTTTCAA   120
CATGCTTCCC AGAAGCATCT CAAGATCAGC AGGCAGGGCT ACTGCAAAAA TTTTTCATCA   180
CCTCCAGAGA AGCTCATTTC TGGGATTCTG GGCATCATCT GGTTTGCCTT ATTGATCACT   240
CTGGTGTTCT CAACAAGAAT TGTTTCTTCA TATACTGAAC AGAAGAAGCA GATCCACTCC   300
CTCCTGAATA GAACCCAGAA AGCACGACCT TGTACTCGTT GCCCAGATGA TTGGATGTCA   360
TATTCTCACA ACTGTTATTA CATTAGTGTG GAGAGAAAAT CTTGGAATGA TGGTTTGACG   420
TCCTGCGTTT CCAAAAACTG TAGCCTGCTT CACATAGATA GTGAAGAGGA GCAGGCTTTT   480
CTGCAGTCCT TTTCATTGGT CTCATGGACT GGATTCTTTC GAAAGAGCAG AAGTCAGCCC   540
TGGGTTTGGG AAAATGGCTC AACTTTCAAA CCAAAGATAA CAGAGATGCT GCATGATGAA   600
TATAACTGTA TCATGATGTC AACTTCTGGT CTCACGGCAG AAAACTGTAC AACTTTACAT   660
CCATATGTTT GTAAGTGCAA ATTCACCAAC TGA                                693