Sequences for RATNO05721

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO05721 (M0R9X6)

E Rattus norvegicus | Paired immunoglobulin-like type 2 receptor beta-2- [Pilrb2l4]

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Orthologs 1

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	RATNO05722 reference isoform	264			5	F7FGP9
	RATNO05721	224			4	M0R9X6

Protein Sequence

Download: Fasta

MALLVSLPEQ NLAMAWILLL LLLAACLHTA GYQKTQDYGV NQPEQLTGIQ GGSIEIPFSF    60
YFPWELAKDP QMSIAWRWKV FFGEVIYNST LLFLHEHFKG RLIMNWTQGQ TSGVLRILNL   120
KANDQSTYFS RIFLQATEGM KLWQSRAGTK LIIHGTKRIW VLCVAALFPS TFLCCSPQPH   180
FLKSLSTTMA SPSIIPSAVP TAGLENTRGQ RNPSLLNLGA MVGMVMAKVV VIIPLYGWVI   240
FLWWKQRSFI PYLTGSPLLG SLIR                                          264

cDNA Sequence

Download: Fasta

ATGGCCCTGC TGGTCTCACT TCCTGAACAG AATCTGGCTA TGGCTTGGAT CCTCCTTCTT    60
CTGCTGTTGG CAGCATGTCT GCACACTGCA GGATATCAAA AAACGCAGGA CTATGGTGTC   120
AACCAACCAG AACAGCTCAC TGGAATCCAA GGCGGCTCCA TCGAGATCCC CTTCTCATTC   180
TACTTCCCCT GGGAGTTGGC CAAGGATCCA CAGATGAGCA TAGCCTGGAG ATGGAAGGTA   240
TTCTTTGGGG AAGTCATCTA CAACTCCACC CTGCTTTTCC TTCATGAGCA TTTTAAGGGC   300
CGGCTCATCA TGAATTGGAC ACAGGGTCAG ACATCAGGAG TCCTCAGAAT CCTGAACTTA   360
AAGGCGAATG ACCAGTCCAC ATACTTCAGC CGAATTTTTC TGCAAGCCAC AGAAGGCATG   420
AAGTTGTGGC AGTCTAGAGC TGGAACCAAA CTCATCATTC ATGGGACCAA GAGAATCTGG   480
GTCCTGTGTG TTGCTGCATT GTTTCCTTCA ACTTTTCTCT GTTGCTCCCC ACAACCCCAC   540
TTTTTAAAAT CTCTCAGTAC TACCATGGCG AGCCCCTCCA TCATCCCCTC TGCAGTCCCC   600
ACAGCTGGCC TGGAGAACAC AAGGGGCCAG AGGAATCCAT CACTGCTGAA CTTGGGAGCC   660
ATGGTTGGGA TGGTCATGGC CAAAGTTGTG GTCATCATCC CCCTCTATGG ATGGGTGATC   720
TTCCTGTGGT GGAAGCAAAG ATCATTTATT CCTTACCTAA CAGGCTCCCC ACTGCTAGGA   780
TCTCTCATCA GGTGA                                                    795