Sequences for RABIT08668

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RABIT08668 (ENSOCUG00000001130.2)

E Oryctolagus cuniculus

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Orthologs 223

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 3
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	RABIT08668 reference isoform	219			5	ENSOCUG00000001130.2

Protein Sequence

Download: Fasta

MKNTDIRRLF YAHLLCVLSV ILSTFVPSFF LESFSILETH LTWLGICSVS VTAVNLVLYL    60
VVKPNVSSKR SSSSHKVARF LKCCIYFLMS CFSFHVIFVL YGAPLIELVL ETFLFAVILS   120
TFTTVPCLCL LGPNLKAWLR VFSRNGVSSI WENSLQITTI ASFIGAWLGA FPIPLDWGRP   180
WQVWPISCTL GATFGYVAGL VLSPLWIYRN RKQLTYKNN                          219

cDNA Sequence

Download: Fasta

ATGAAAAATA CTGATATCAG GAGACTATTT TATGCCCATC TTTTATGCGT GCTTTCTGTT    60
ATCCTGAGCA CCTTTGTTCC ATCATTCTTT TTGGAAAGTT TCTCGATATT GGAGACCCAC   120
CTGACGTGGT TGGGCATCTG CTCTGTTTCT GTAACTGCTG TCAATCTAGT GTTATATTTA   180
GTAGTGAAAC CAAATGTATC CTCCAAGAGA AGTTCATCAT CACATAAGGT AGCCAGGTTT   240
TTGAAATGCT GTATCTACTT TCTTATGTCT TGTTTCTCCT TTCATGTAAT TTTTGTTCTA   300
TATGGAGCAC CGCTAATAGA GTTGGTGTTG GAAACATTTT TGTTCGCAGT TATTTTGTCT   360
ACCTTCACTA CTGTACCTTG TTTATGTTTG TTGGGACCAA ATCTCAAAGC ATGGCTAAGA   420
GTTTTCAGTA GAAATGGAGT TTCATCCATT TGGGAGAATA GTCTCCAGAT CACTACAATT   480
GCTAGTTTTA TAGGAGCATG GCTTGGAGCA TTTCCTATTC CCTTGGATTG GGGAAGACCA   540
TGGCAGGTGT GGCCCATCTC CTGTACGCTC GGAGCGACCT TTGGCTACGT GGCTGGCCTT   600
GTTCTGTCAC CACTCTGGAT ATACCGGAAT AGAAAGCAAC TTACATACAA GAACAATNNN   660