Sequences for RABIT01082

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
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HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RABIT01082 (ENSOCUG00000000439.3)

E Oryctolagus cuniculus

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Orthologs 879

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 577
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	RABIT01082 reference isoform	256			9	ENSOCUG00000000439.3

Protein Sequence

Download: Fasta

MTMMSLFGVL RIHQIEYAME AVKQGSATVG LKSKTHAVLV ALKRAQSELA AHQKKILHVD    60
NHIGISIAGL TADARLLCNF MRQECLDSRF VFDRPLPVSR LVSLIGSKTQ IPTQRYGRRP   120
YGVGLLIAGY DDMGPHIFQT CPSANYFDCR AMSIGARSQS ARTYLERHMS EFMECNLNEL   180
VKHGLRALRE TLPAEQDLTT KNVSIGIVGK DLEFTIYDDD DVSPFLEGLE ERPQRKAQPA   240
QPADEPAEKA DEPMEH                                                   256

cDNA Sequence

Download: Fasta

ATGACAATGA TGTCACTGTT TGGAGTCCTC AGGATTCATC AAATTGAATA TGCAATGGAA    60
GCTGTTAAGC AAGGTTCAGC CACAGTTGGT CTGAAATCAA AAACCCATGC AGTGTTGGTT   120
GCATTGAAGA GGGCACAGTC AGAGCTTGCA GCTCATCAGA AAAAAATTCT CCATGTTGAC   180
AACCATATTG GTATTTCAAT TGCGGGGCTT ACTGCTGATG CTAGGCTGTT ATGTAATTTT   240
ATGCGCCAGG AATGTTTGGA TTCCAGATTT GTATTTGACA GACCACTTCC GGTGTCTCGT   300
CTTGTATCTC TAATTGGAAG CAAGACCCAG ATACCAACAC AAAGGTATGG CCGAAGACCC   360
TATGGTGTTG GACTGCTTAT TGCTGGATAT GATGATATGG GCCCTCACAT TTTCCAAACC   420
TGTCCATCTG CTAACTATTT TGACTGCAGA GCTATGTCCA TTGGAGCCCG TTCTCAATCA   480
GCTCGTACTT ACTTGGAAAG ACATATGTCT GAGTTTATGG AGTGCAATTT AAATGAACTG   540
GTTAAACATG GCCTGCGTGC ATTAAGAGAG ACACTTCCTG CAGAGCAGGA CCTGACTACA   600
AAGAATGTTT CCATTGGAAT TGTTGGCAAA GACTTGGAGT TTACAATTTA TGATGATGAT   660
GATGTATCTC CATTCCTGGA AGGTCTTGAA GAAAGACCAC AGAGGAAGGC ACAGCCTGCT   720
CAGCCTGCCG ATGAACCTGC AGAGAAGGCT GATGAGCCAA TGGAACACTG A            771