Sequences for PSEDA00697

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
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HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PSEDA00697 (A0A084GB46)

E Pseudallescheria apiosperma | ATP synthase subunit 4

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Orthologs 266

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	PSEDA00697 reference isoform	243			4	A0A084GB46

Protein Sequence

Download: Fasta

MASRLARSAV GANLLRPTVA RRTVPALTAL TTARHSSSVP TEDPKKKAQS IVDALPGSSL    60
LSKTAILSSA AGLSVYAISN EYYVMNEETV VAFCLLAVWG GLIKYVGPLY SQWANGQNDK   120
IKNILNQARA DHTAAVQSRI EDVKQMEGVV DITKTLFEIS KETAKLEAEA FELEQKTALA   180
AEAKAVLDSW VRYEGQVKQR QQKELAESII ANVERDLKNP KVLQQILQQS VADVERIVSS   240
KAQ                                                                 243

cDNA Sequence

Download: Fasta

ATGGCGTCTC GCTTGGCTCG AAGCGCCGTC GGCGCCAACC TTCTCCGGCC GACCGTCGCC    60
CGACGAACCG TGCCTGCTCT CACCGCGCTC ACGACCGCCC GCCACTCGTC CAGCGTCCCG   120
ACCGAGGACC CCAAGAAGAA GGCCCAGTCC ATCGTCGATG CGCTCCCCGG CAGCAGCCTC   180
CTCTCCAAGA CCGCCATCCT CTCCAGCGCT GCCGGTCTCT CCGTTTACGC CATCAGCAAT   240
GAGTACTACG TGATGAACGA GGAGACCGTC GTGGCCTTCT GCCTTCTCGC CGTCTGGGGT   300
GGTCTCATCA AGTACGTCGG TCCTCTGTAC TCGCAGTGGG CCAACGGCCA GAACGACAAG   360
ATCAAGAACA TCCTCAACCA GGCTAGGGCC GACCATACCG CCGCCGTCCA GAGCCGCATT   420
GAGGATGTGA AGCAGATGGA GGGTGTTGTC GACATCACCA AGACCCTCTT CGAGATTTCG   480
AAGGAAACCG CCAAGCTCGA GGCCGAGGCT TTCGAGCTCG AGCAGAAGAC TGCCCTTGCC   540
GCCGAGGCCA AGGCTGTCCT CGACTCCTGG GTCCGATACG AGGGCCAGGT TAAGCAGCGA   600
CAACAGAAGG AGCTTGCCGA GAGCATCATC GCCAATGTGG AAAGGGATCT CAAGAACCCC   660
AAGGTCCTTC AGCAGATCCT CCAGCAGAGC GTTGCGGATG TTGAGAGAAT TGTTTCCTCC   720
AAGGCCCAAT AG                                                       732