Sequences for PROCO28632

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
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HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PROCO28632 (A0A2K6G7R6)

E Propithecus coquereli | Syndecan [SDC4]

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Orthologs 123

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	PROCO28632 reference isoform	200			5	A0A2K6G7R6

Protein Sequence

Download: Fasta

MAPARLLALL LLFVGAPAAA ESIRETEVID PQDLLEGRYF SGALPDDEDV GVPGQEPDDL    60
ELSGSGDLDD SEDPRVFPEV IHPLVPLDNH IPERAGPGRQ VPTEPKELEE NEVIPKRISP   120
FDGDEDVSNK VSMSSTAQDS NIFERTEVLA ALIVGGVVGI LFAVFLILLL VYRMKKKDEG   180
SYDLGKKPIY KKAPTNEFYA                                               200

cDNA Sequence

Download: Fasta

ATGGCCCCCG CCCGCCTGCT CGCGCTGCTC CTGCTCTTCG TAGGCGCCCC CGCCGCCGCC    60
GAGTCGATCC GGGAGACTGA GGTCATCGAC CCCCAGGACC TCCTGGAAGG CCGGTACTTC   120
TCGGGAGCCC TACCAGATGA TGAGGACGTG GGGGTGCCTG GGCAGGAACC CGATGACTTG   180
GAGCTGTCCG GCTCTGGAGA CCTGGATGAC TCAGAGGACC CCAGGGTCTT CCCTGAAGTG   240
ATCCACCCCT TGGTGCCTCT AGATAACCAC ATCCCTGAGA GGGCAGGCCC TGGGCGCCAG   300
GTCCCCACCG AACCCAAGGA ACTGGAGGAG AATGAGGTTA TCCCCAAGAG GATCTCACCC   360
TTTGATGGGG ATGAGGATGT GTCTAACAAG GTGTCCATGT CCAGCACTGC CCAGGACAGC   420
AACATCTTTG AGAGAACAGA GGTCCTGGCA GCTCTGATTG TGGGCGGCGT GGTGGGCATC   480
CTCTTCGCCG TGTTCCTGAT CCTGCTGCTG GTGTACCGCA TGAAGAAGAA GGACGAGGGC   540
AGCTATGATC TGGGCAAGAA ACCCATCTAC AAAAAAGCCC CCACCAATGA GTTCTACGCA   600
TGA                                                                 603