Sequences for PONAB27500

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PONAB27500 (H2PEE5)

E Pongo abelii | Glycophorin [GYPA]

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Orthologs 28

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 1
Gene information
GO Annotations
Sequences/Isoforms 9
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	PONAB27499	145			6	A0A8I5YLA2
	PONAB27501	137			6	A0A2J8XNX0
	PONAB27502	118			6	A0A2J8XNW5
	PONAB27503	117			6	A0A2J8XNU5
	PONAB27504	105			5	H2PEZ2
	PONAB27505	85			5	A0A2J8XNZ2
	PONAB27506	72			4	A0A8I5YPV8
	PONAB27507	148			7	A0A2J8XNY2
	PONAB27500 reference isoform	150			7	H2PEE5

Protein Sequence

Download: Fasta

MYEKIIFVLL LSEIVSIPAS NTTGEVMHTS ISSSVTKSYI TPQTNDKHKQ DTYPATPSAH    60
EVSEISVITI HSPEEENGER GQLVHRFSEP VITLIVFGVM AGVIGTILLI SYCIRRLRKQ   120
SPSDVQPLPS PDTDVPLSSV EIENPETIDQ                                    150

cDNA Sequence

Download: Fasta

ATGTATGAAA AAATAATCTT TGTATTACTA TTGTCAGAAA TTGTGAGCAT ACCAGCATCA    60
AATACCACCG GTGAGGTAAT GCACACTTCA ATCTCTTCTT CGGTCACAAA GAGTTACATC   120
ACACCACAGA CAAATGACAA GCACAAACAG GACACATATC CAGCCACTCC TAGTGCTCAT   180
GAAGTTTCAG AAATTTCTGT TATAACCATT CACTCTCCAG AAGAGGAAAA CGGAGAAAGG   240
GGACAACTTG TCCATCGTTT CTCTGAACCA GTGATAACAC TCATTGTTTT TGGGGTGATG   300
GCTGGTGTTA TTGGAACGAT CCTCTTAATT TCTTACTGTA TTCGCCGACT GAGAAAGCAA   360
AGCCCATCTG ATGTGCAACC TCTCCCCTCA CCTGACACAG ACGTGCCTTT AAGTTCTGTT   420
GAAATAGAAA ATCCAGAGAC AATTGATCAA TGA                                453