Sequences for PHACI21860

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PHACI21860 (A0A6P5KNT5)

E Phascolarctos cinereus | Microtubule-associated protein RP/EB family member [MAPRE1]

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Orthologs 901

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 855
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	PHACI21860 reference isoform	268			6	A0A6P5KNT5

Protein Sequence

Download: Fasta

MAVNVYSTSV TSDNLSRHDM LAWINESLQL TLTKIEHLCS GAAYCQFMDM LFPGSIALKK    60
VKFQAKLEHE YIQNFKILQA GFKRMGVDKI IPVDKLVKGK FQDNFEFVQW FKKFFDANYD   120
GKDYDPVAAR QGQETAVAPS LMTPVLNKSK KPLGSSGAAP QRPISTQRTT APSKTGPGMV   180
RKNPGMGNGD DESAELIQQI NVLKVTVEDL EKERDFYFGK LRNIELICQE NEGESDPVLQ   240
RIVEILYATD EGFVIPDEGG PQEEQEEY                                      268

cDNA Sequence

Download: Fasta

ATGGCAGTTA ACGTGTATTC AACTTCAGTA ACTAGTGATA ATTTGAGTCG ACATGATATG    60
CTGGCCTGGA TCAATGAATC TCTGCAGTTG ACCTTGACAA AGATTGAACA CTTATGTTCA   120
GGTGCTGCCT ATTGTCAGTT TATGGATATG CTTTTCCCTG GTTCCATTGC TCTTAAGAAA   180
GTGAAGTTTC AAGCAAAACT GGAACATGAA TACATTCAGA ACTTCAAGAT CCTACAAGCA   240
GGTTTTAAGA GAATGGGTGT TGACAAAATA ATTCCTGTGG ACAAATTAGT GAAAGGAAAA   300
TTTCAGGACA ATTTTGAATT TGTTCAATGG TTCAAGAAAT TTTTTGATGC AAACTATGAT   360
GGGAAAGACT ATGACCCTGT AGCAGCTCGA CAAGGCCAAG AAACGGCAGT AGCCCCCTCC   420
CTTATGACTC CAGTTTTGAA TAAGTCAAAA AAACCTCTTG GTTCCAGTGG TGCAGCTCCA   480
CAGAGGCCCA TTTCTACACA GAGAACTACA GCACCTTCCA AGACAGGCCC TGGCATGGTC   540
AGAAAGAATC CAGGTATGGG AAATGGAGAT GATGAGTCAG CAGAATTAAT CCAGCAGATC   600
AATGTATTGA AAGTCACTGT TGAAGACTTG GAAAAAGAGA GAGACTTCTA CTTTGGAAAG   660
CTAAGGAATA TTGAATTGAT TTGTCAGGAA AATGAAGGGG AAAGTGATCC AGTGTTGCAG   720
AGGATTGTGG AGATTCTCTA TGCCACAGAT GAAGGCTTTG TGATACCTGA TGAAGGGGGA   780
CCACAAGAGG AGCAAGAAGA GTATTAA                                       807