Sequences for PAPAN28357

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PAPAN28357 (A0A8I5NU77)

E Papio anubis | Glycophorin

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Orthologs 29

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 5
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	PAPAN28358	117			5	A0A2I3MS31
	PAPAN28359	97			5	A0A096NPL7
	PAPAN28360	84			4	A0A8I5R0T4
	PAPAN28361	160			7	A0A8I5RA43
	PAPAN28357 reference isoform	162			7	A0A8I5NU77

Protein Sequence

Download: Fasta

MYGKIIFVLL LSEIVRISAS STTVPATHTS TSSLVPESYV SSQSNDKHTS DTYPTTPSAH    60
EVSGFSGRTH YPPEEDNRER VQLVHEFSEL VIALIIFGVM AGVIGTILFI SYCIRRLRKK   120
SPSDVQPLPP PDAEVPLSSV EIENPEETDQ SNLFTKPNEE GT                      162

cDNA Sequence

Download: Fasta

ATGTATGGAA AAATAATCTT TGTATTACTA TTGTCAGAAA TTGTGAGAAT ATCAGCATCA    60
AGTACCACTG TTCCGGCAAC GCACACTTCC ACCTCTTCTT TGGTCCCAGA GAGTTATGTC   120
TCATCACAGT CAAATGATAA GCACACATCG GACACATATC CAACCACTCC TAGTGCTCAT   180
GAAGTTTCGG GATTTTCTGG TAGAACCCAT TACCCTCCAG AAGAGGACAA CAGAGAACGG   240
GTACAACTTG TCCATGAATT CTCTGAACTA GTGATAGCAC TCATTATTTT TGGGGTGATG   300
GCTGGTGTCA TTGGAACGAT CCTCTTTATT TCTTACTGTA TTCGCCGACT GAGAAAGAAA   360
AGCCCATCTG ATGTACAACC TCTCCCCCCA CCTGACGCAG AGGTGCCTTT AAGCTCTGTT   420
GAAATAGAAA ATCCAGAGGA AACTGATCAA TCGAATCTGT TCACCAAACC AAATGAGGAA   480
GGAACATAA                                                           489