Sequences for PAPAN06086

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PAPAN06086 (A0A096N0U8)

E Papio anubis | Tetraspanin [CD82]

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Orthologs 185

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 46
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	PAPAN06087	242			7	A0A2I3LRB4
	PAPAN06086 reference isoform	267			8	A0A096N0U8

Protein Sequence

Download: Fasta

MGSACIKVTK YFLFLFNLIF FILGAVILGF GVWILADKSS FISVLQTSSS SLRMGAYVFI    60
GVGAVTMLMG FLGCIGAVNE VRCLLGLYFA FLLLILIAQV TAGALFYFNM GKLKQEMGGI   120
VMELIRDYNS SREDSLQDTW DYVQAQVKCC GWASFYNWTD NTELMNRSEV TYPCSCENKG   180
EEDNSLSMRK GFCETAGNKT QRGNNLEDWP VYQKGCMEKV QAWLQENLGI ILGVGVGVAV   240
IELLGMVLSI CLCRHVHSED YSKVPKY                                       267

cDNA Sequence

Download: Fasta

ATGGGCTCAG CCTGTATCAA AGTCACCAAA TACTTTCTCT TCCTCTTCAA CTTGATCTTC    60
TTTATCCTGG GCGCAGTGAT TCTGGGCTTC GGGGTGTGGA TCCTGGCCGA CAAGAGCAGT   120
TTCATCTCTG TCCTGCAAAC CTCCTCCAGC TCGCTCAGGA TGGGGGCCTA CGTCTTCATC   180
GGCGTGGGGG CAGTCACCAT GCTCATGGGC TTCCTGGGCT GCATTGGCGC CGTCAATGAG   240
GTCCGCTGTC TGCTGGGGCT GTACTTTGCC TTCCTGCTCC TGATCCTCAT TGCCCAGGTG   300
ACGGCCGGGG CCCTCTTCTA CTTCAACATG GGCAAGCTGA AGCAGGAGAT GGGCGGCATC   360
GTGATGGAGC TCATTCGAGA TTACAACAGC AGTCGCGAGG ACAGCCTGCA GGACACCTGG   420
GACTACGTGC AGGCTCAGGT GAAGTGCTGC GGCTGGGCCA GCTTCTACAA CTGGACGGAC   480
AACACTGAGC TCATGAATCG CTCTGAGGTC ACCTACCCCT GTTCCTGCGA AAACAAAGGG   540
GAAGAGGACA ACAGCCTTTC CATGAGGAAG GGCTTCTGCG AGACTGCTGG CAACAAGACC   600
CAGAGGGGCA ACAACCTTGA GGACTGGCCT GTGTACCAGA AGGGCTGCAT GGAGAAGGTG   660
CAGGCGTGGC TGCAGGAGAA CCTGGGCATC ATCCTCGGCG TGGGCGTGGG CGTGGCTGTC   720
ATTGAGCTCC TGGGGATGGT CCTGTCCATC TGCTTGTGCC GGCACGTCCA TTCCGAAGAC   780
TACAGCAAGG TCCCCAAGTA CTGA                                          804