Sequences for PANTR36428

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
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HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANTR36428 (A0A2I3RLK4)

E Pan troglodytes | Glucosamine-6-phosphate isomerase [GNPDA1]

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Orthologs 1452

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 251
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	PANTR36429	289			6	A0A6D2Y8B4
	PANTR36428 reference isoform	274			6	A0A2I3RLK4

Protein Sequence

Download: Fasta

MKLIILEHYS QASEWAAKYI RNRIIQFNPG PEKYFTLGLP TGSTPLGCYK KLIEYYKNGD    60
LSFKYVKTFN MDEYVGLPRD HPESYHSFMW NNFFKHIDIH PENTHILDGN AVDLQAECDA   120
FEEKIKAAGG IELFVGGIGP DGHIAFNEPG SSLVSRTRVK TLAMDTILAN ARFFDGELTK   180
VPTMALTVGV GTVMDAREVM ILITGAHKAF ALYKAIEEGV NHMWTVSAFQ QHPRTVFVCD   240
EDATLELKVK TVKYFKAPPQ VNRKGYIYST NFGI                               274

cDNA Sequence

Download: Fasta

ATGAAGCTCA TCATCCTGGA GCACTATTCT CAGGCCAGCG AGTGGGCGGC TAAATACATC    60
AGGAACCGCA TCATCCAGTT TAACCCAGGG CCAGAGAAGT ACTTCACCCT GGGGCTTCCC   120
ACTGGGAGTA CCCCACTTGG CTGCTACAAG AAGCTGATTG AATACTATAA GAATGGGGAC   180
CTGTCCTTTA AATATGTGAA GACTTTCAAC ATGGATGAGT ACGTGGGCCT TCCTCGAGAC   240
CACCCGGAGA GTTACCACTC CTTCATGTGG AACAACTTCT TCAAGCACAT TGACATCCAC   300
CCAGAAAACA CCCACATTCT GGATGGGAAT GCAGTCGACC TACAGGCAGA ATGTGATGCC   360
TTTGAAGAGA AGATCAAGGC TGCAGGTGGG ATCGAGCTAT TTGTTGGAGG CATCGGCCCT   420
GATGGACACA TTGCCTTCAA CGAGCCAGGC TCCAGTCTGG TGTCCAGGAC CCGTGTGAAG   480
ACGCTGGCCA TGGATACCAT CCTGGCCAAT GCTAGGTTCT TCGATGGAGA ACTCACCAAG   540
GTGCCCACCA TGGCCTTGAC GGTGGGGGTG GGCACTGTCA TGGATGCTAG AGAGGTGATG   600
ATCCTTATCA CAGGTGCTCA CAAGGCATTT GCTCTGTACA AGGCCATCGA GGAGGGAGTG   660
AACCACATGT GGACCGTGTC TGCCTTCCAG CAGCATCCCC GCACCGTGTT TGTGTGTGAC   720
GAGGATGCCA CCTTGGAGCT GAAAGTGAAG ACTGTCAAGT ATTTCAAAGC TCCTCCACAG   780
GTCAACAGGA AGGGATACAT CTACTCAACA AACTTCGGGA TTTAG                   825