Sequences for PANTR04337

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANTR04337 (A0A6D2XWV5)

E Pan troglodytes | Placenta-expressed transcript 1 protein [PLET1]

‹

Orthologs 51

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	PANTR04337 reference isoform	207			4	A0A6D2XWV5

Protein Sequence

Download: Fasta

MAVFHDMLLQ PLGMFLCLSL QLSSAIFIRY SSTCFTFDEY YTVTLDIKAS SHIYESNAVY    60
SVFVPVNDSV YAVVMKTLDE NSDSAGLWQR ADKNCYSNST YYVKDQYMTV LEAQWQAPEP   120
ENITEVEIQA FTVQIRALPI LSTLKLREKL STLALAAKIP QSSAFKPFFM ITPKSIRLEG   180
LANQVFSSPI TDAIYILLAF LTSTLLF                                       207

cDNA Sequence

Download: Fasta

ATGGCAGTCT TCCATGACAT GCTGCTGCAG CCACTGGGGA TGTTTCTGTG CCTCAGTCTG    60
CAGCTTTCTT CTGCCATCTT TATAAGGTAC AGTAGCACCT GCTTCACCTT TGATGAATAC   120
TACACCGTAA CCCTAGACAT CAAGGCCAGT TCACATATCT ACGAAAGCAA TGCAGTCTAT   180
TCTGTATTTG TTCCCGTGAA TGACAGCGTC TATGCTGTGG TCATGAAAAC CTTGGACGAG   240
AACAGTGACT CAGCGGGCCT CTGGCAAAGA GCGGATAAAA ATTGCTACAG CAACTCCACG   300
TATTACGTGA AAGATCAATA CATGACGGTC TTAGAGGCAC AGTGGCAAGC TCCTGAACCT   360
GAGAACATAA CTGAAGTGGA GATACAAGCT TTCACTGTCC AGATCAGAGC GCTGCCTATA   420
CTTTCTACTC TGAAGCTAAG AGAAAAACTG TCAACCTTAG CCTTAGCTGC CAAGATTCCC   480
CAGAGCTCAG CCTTCAAGCC TTTCTTCATG ATTACGCCCA AGAGTATCAG ACTCGAAGGC   540
TTGGCCAACC AAGTCTTCAG CAGCCCCATC ACAGATGCCA TTTATATCCT GCTTGCTTTT   600
CTCACCAGCA CACTTCTCTT CTAA                                          624