Sequences for PANPA08636

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANPA08636 (A0A2R8ZZN7)

E Pan paniscus | C-type lectin domain containing 6A [CLEC6A]

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Orthologs 125

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	PANPA08636 reference isoform	208			7	A0A2R8ZZN7

Protein Sequence

Download: Fasta

MMQEQQPQST EKRGWWSLRL WSVAGISIAL LSACFIVSCV VTYHFTYGEN GKRLSELHSY    60
HSSLTCFSEG TKVPAWGCCP ASWKSFGSSC YYISSEEKVW SKSEQNCVKM GAHLVVFNTE   120
AEQNFIVQQL NEFSYFLGLS DPQGNNNWQW IDKTPYEKNV RFWHLGEPNH SAEQCASIVF   180
WKPTGWGWND VICETRRNSI CEMNKIYL                                      208

cDNA Sequence

Download: Fasta

ATGATGCAAG AGCAGCAACC TCAAAGTACA GAGAAAAGAG GCTGGTGGTC CCTGAGACTC    60
TGGTCTGTGG CTGGGATTTC CATTGCACTC CTCAGTGCTT GCTTCATTGT GAGCTGTGTA   120
GTAACTTACC ATTTTACATA TGGTGAAAAT GGCAAAAGGC TGTCTGAACT ACACTCATAT   180
CATTCAAGTC TCACCTGCTT CAGTGAAGGG ACAAAGGTGC CAGCCTGGGG ATGTTGCCCA   240
GCTTCTTGGA AGTCATTTGG TTCCAGTTGC TACTACATTT CCAGTGAAGA GAAGGTTTGG   300
TCTAAGAGTG AGCAGAACTG TGTTAAGATG GGAGCACATT TGGTTGTGTT CAACACAGAA   360
GCAGAGCAGA ATTTCATTGT CCAGCAGCTG AACGAGTTTT CTTATTTTCT GGGGCTTTCA   420
GACCCACAAG GTAATAATAA TTGGCAATGG ATTGATAAGA CACCTTATGA GAAAAATGTC   480
AGATTTTGGC ACCTAGGTGA GCCCAATCAT TCTGCAGAGC AATGTGCTTC AATAGTCTTC   540
TGGAAACCTA CAGGATGGGG TTGGAATGAT GTTATCTGTG AAACTAGAAG GAATTCAATA   600
TGTGAGATGA ATAAGATTTA CCTATGA                                       627