Sequences for OTOGA14372

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene OTOGA14372 (H0WTP5)

E Otolemur garnettii | Transmembrane p24 trafficking protein family membe [TMED8]

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Orthologs 160

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	OTOGA14372 reference isoform	264			4	H0WTP5

Protein Sequence

Download: Fasta

SSSERPQMVS PVSKDATEEL QKAAGALETQ ALVEQDLLPT DQAQVLSEIP KYQVPQRSGD    60
IVMIQSEHTG AIDIVSADLE SADLLGDHRK VSPPLMAPPC IWTFAKVKEF KSKLGKEKNS   120
RLVVKRGEVV TIRVPTHPEG KRVCWEFATD DYDIGFGVYF DWTPVTSTDI TVQVSDSSED   180
EDEEEEEEEE IEEPVPVGDV ERGSRSSLRG RYGEVMPVYR RDSHRDVQAG SHDYPGEGIY   240
LLKFDNSYSL LRNKTLYFHI YYTS                                          264

cDNA Sequence

Download: Fasta

TCTTCCTCTG AGAGGCCACA GATGGTATCT CCGGTAAGTA AGGATGCCAC AGAAGAACTG    60
CAGAAAGCAG CTGGTGCCTT GGAGACTCAG GCATTGGTGG AACAGGATTT GCTGCCTACA   120
GACCAAGCCC AGGTCCTCAG TGAGATACCC AAGTATCAAG TTCCACAAAG GTCTGGAGAC   180
ATCGTTATGA TCCAGTCTGA GCATACGGGA GCTATAGACA TTGTTTCAGC TGATTTGGAA   240
TCTGCAGATC TTCTGGGGGA CCACAGGAAA GTCTCACCAC CTCTGATGGC TCCTCCATGC   300
ATCTGGACCT TTGCCAAGGT GAAGGAATTT AAAAGCAAGC TGGGCAAAGA GAAGAACAGC   360
CGTCTGGTGG TGAAGCGGGG CGAGGTGGTG ACTATCCGGG TACCTACTCA CCCAGAAGGG   420
AAGCGTGTCT GCTGGGAGTT TGCAACTGAT GACTATGACA TTGGCTTTGG AGTTTATTTT   480
GACTGGACCC CTGTAACCAG CACTGACATA ACTGTGCAGG TCAGTGATTC CAGTGAGGAT   540
GAGGATGAAG AAGAGGAAGA GGAAGAAGAG ATTGAAGAAC CTGTTCCAGT TGGAGATGTG   600
GAGAGAGGCT CCAGGAGTTC CCTGCGGGGT CGCTACGGGG AGGTCATGCC TGTGTACCGG   660
CGAGACAGCC ACCGAGATGT GCAGGCTGGC AGCCATGACT ACCCTGGCGA GGGCATCTAC   720
CTGCTCAAGT TCGACAACTC CTATTCCCTG CTACGCAACA AGACTCTCTA CTTCCACATC   780
TACTACACTA GCTGA                                                    795