Sequences for OTOGA02397

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene OTOGA02397 (H0WJI2)

E Otolemur garnettii | Elongation of very long chain fatty acids protein [ELOVL1]

‹

Orthologs 890

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 609
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	OTOGA02397 reference isoform	279			7	H0WJI2

Protein Sequence

Download: Fasta

MEAVVNLYHR MIKHADPRVQ GYPLMGSPLL MTSILLTYVY FVLSLGPRIM ANRKPFQLRG    60
FMIVYNFSLV ALSFYIVYEF LMSGWLSTYT WRCDPVDYSN SPEALRMVRV AWLFLFSKFI   120
ELMDTVIFIL RKKDGQVTFL HVFHHSVLPW SWWWGVKIAP GGMGSFHAMI NSSVHVVMYL   180
YYGLSALGPV AQPYLWWKKH MTAIQLIQFV LVSLHISQYY FMPSCNYQYP VIIHLIWMYG   240
TIFFVLFSNF WYHSYTKGKR LPRALQQNGA PGVAKVKAN                          279

cDNA Sequence

Download: Fasta

ATGGAGGCTG TTGTGAACTT GTACCACAGG ATGATAAAGC ATGCAGATCC CCGGGTCCAG    60
GGCTACCCTC TGATGGGGTC CCCCCTGTTA ATGACCTCCA TCCTTCTGAC CTATGTGTAC   120
TTCGTTCTCT CACTTGGGCC TCGAATCATG GCCAATCGGA AACCCTTCCA GCTCCGTGGT   180
TTCATGATTG TCTACAACTT TTCACTGGTG GCACTCTCCT TCTACATTGT CTATGAGTTC   240
CTGATGTCTG GTTGGCTGAG TACCTATACC TGGCGCTGTG ACCCTGTGGA CTATTCCAAT   300
AGCCCTGAGG CACTTAGGAT GGTTCGAGTG GCCTGGCTTT TCCTCTTCTC CAAGTTCATT   360
GAGCTGATGG ACACAGTCAT CTTTATTCTC CGGAAGAAGG ATGGGCAGGT GACCTTCCTG   420
CATGTCTTCC ATCACTCAGT GCTTCCCTGG AGCTGGTGGT GGGGTGTAAA GATTGCCCCA   480
GGAGGAATGG GCTCTTTCCA TGCCATGATT AACTCCTCTG TGCACGTTGT CATGTACCTG   540
TACTATGGGT TATCTGCCCT AGGCCCTGTG GCTCAGCCCT ACCTTTGGTG GAAAAAGCAC   600
ATGACAGCCA TCCAACTGAT CCAGTTTGTC CTGGTCTCAC TGCACATCTC CCAGTACTAC   660
TTCATGCCTA GTTGTAACTA CCAGTACCCG GTAATTATTC ACCTCATCTG GATGTATGGC   720
ACTATCTTCT TTGTGCTGTT CTCCAATTTC TGGTATCACT CTTACACCAA AGGCAAGCGG   780
CTGCCCCGTG CACTTCAGCA AAATGGAGCT CCAGGTGTTG CCAAGGTTAA GGCCAACTGA   840