Sequences for ORENI73960

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ORENI73960 (I3JGM2)

E Oreochromis niloticus | Inositol-1-monophosphatase [IMPA1]

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Orthologs 3094

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 1016
Gene information
GO Annotations
Sequences/Isoforms 3
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	ORENI73961	279			7	A0A669EXX5
	ORENI73962	278			8	I3JGM2
	ORENI73960 reference isoform	278			8	I3JGM2

Protein Sequence

Download: Fasta

MSDPWQECMD YCIEVTKRAG KMICEALQKD IAVMHKSSAV DLVTETDQKV EQLIISSIRE    60
KYPTHSFIGE ESVAAGAPSA LSDNPTWIID PIDGTTNFVH RFPFVSVSIG FTVKKEIEFG   120
IVYSCIEDKM YTARKGKGAF CNGVPIKVSG QEDISKSLVL TEMGFKKDAE QFQTMMANIR   180
NILSIPVHGI RSPGSAAVNM CLVACGSADA YYHMGIHCWD MAGGAAVVRE AGGVIMDISG   240
GPFDLMSRRL IVASSRMIAE RIAKEITEFH VGRDDTDD                           278

cDNA Sequence

Download: Fasta

ATGAGTGATC CGTGGCAGGA ATGCATGGAT TATTGCATAG AGGTCACTAA ACGGGCCGGA    60
AAGATGATCT GTGAGGCGCT CCAAAAGGAC ATCGCCGTCA TGCACAAGAG CTCAGCGGTT   120
GACCTGGTGA CCGAGACGGA CCAGAAAGTG GAACAGCTCA TTATATCTTC CATCAGGGAA   180
AAGTACCCAA CACACAGCTT TATAGGCGAG GAGTCTGTAG CAGCAGGCGC CCCCAGCGCC   240
CTCTCTGACA ATCCCACTTG GATTATCGAC CCTATCGATG GGACCACCAA CTTTGTTCAC   300
AGGTTCCCGT TTGTGTCTGT ATCAATCGGT TTCACAGTGA AGAAAGAGAT AGAGTTTGGG   360
ATTGTCTACA GCTGCATCGA GGACAAAATG TACACAGCAC GTAAAGGAAA GGGAGCATTT   420
TGCAATGGAG TCCCAATCAA GGTGTCTGGA CAAGAAGATA TTAGTAAATC CTTGGTGCTG   480
ACAGAAATGG GCTTCAAGAA GGACGCAGAG CAATTTCAAA CAATGATGGC CAACATCAGA   540
AACATCCTCA GCATCCCTGT ACATGGAATC CGCTCCCCAG GCAGCGCAGC TGTCAACATG   600
TGTCTGGTAG CGTGCGGATC GGCTGATGCT TACTACCACA TGGGCATCCA CTGCTGGGAC   660
ATGGCTGGAG GGGCAGCAGT TGTCAGAGAA GCTGGAGGAG TCATCATGGA CATTTCAGGT   720
GGACCATTTG ATTTGATGTC TCGCAGGCTG ATTGTGGCCA GCAGCAGAAT GATAGCAGAA   780
CGCATTGCAA AGGAGATAAC AGAGTTTCAC GTTGGCAGGG ATGACACTGA TGACTAG      837