Sequences for HUMAN26052

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN26052 (CLD9_HUMAN)

E Homo sapiens | Claudin-9 [CLDN9]

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Orthologs 150

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 56
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN26052 reference isoform	217			1	CLD9_HUMAN

Protein Sequence

Download: Fasta

MASTGLELLG MTLAVLGWLG TLVSCALPLW KVTAFIGNSI VVAQVVWEGL WMSCVVQSTG    60
QMQCKVYDSL LALPQDLQAA RALCVIALLL ALLGLLVAIT GAQCTTCVED EGAKARIVLT   120
AGVILLLAGI LVLIPVCWTA HAIIQDFYNP LVAEALKREL GASLYLGWAA AALLMLGGGL   180
LCCTCPPPQV ERPRGPRLGY SIPSRSGASG LDKRDYV                            217

cDNA Sequence

Download: Fasta

ATGGCTTCGA CCGGCTTAGA ACTGCTGGGC ATGACCCTGG CTGTGCTGGG CTGGCTGGGG    60
ACCCTGGTGT CCTGCGCCCT GCCCCTGTGG AAGGTGACCG CCTTCATCGG CAACAGCATC   120
GTGGTGGCCC AGGTGGTGTG GGAGGGCCTG TGGATGTCCT GCGTGGTGCA GAGCACGGGC   180
CAGATGCAGT GCAAGGTGTA CGACTCACTG CTGGCTCTGC CGCAGGACCT GCAGGCCGCA   240
CGTGCCCTCT GTGTCATTGC CCTCCTGCTG GCCCTGCTTG GCCTCCTGGT GGCCATCACA   300
GGTGCCCAGT GTACCACGTG TGTGGAGGAC GAAGGTGCCA AGGCCCGTAT CGTGCTCACC   360
GCGGGGGTCA TCCTCCTCCT CGCCGGCATC CTGGTGCTCA TCCCTGTGTG CTGGACGGCG   420
CACGCCATCA TCCAGGACTT CTACAACCCC CTGGTGGCTG AGGCCCTCAA GCGGGAGCTG   480
GGGGCCTCCC TCTACCTGGG CTGGGCGGCG GCTGCACTGC TTATGCTGGG CGGGGGGCTC   540
CTCTGCTGCA CGTGCCCCCC GCCCCAGGTC GAGCGGCCCC GCGGACCTCG GCTGGGCTAC   600
TCCATCCCCT CCCGCTCGGG TGCATCTGGA CTGGACAAGA GGGACTACGT GTGA         654