Sequences for MOUSE66631

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE66631 (CX065_MOUSE)

E Mus musculus | Uncharacterized protein CXorf65 homolog [Gm614]

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Orthologs 83

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MOUSE66631 reference isoform	191			6	CX065_MOUSE

Protein Sequence

Download: Fasta

MFIIIKHGDN QEFLVNSNCS VLLLLHYIRK KMKLRKTDTI DLCDESGTMK LLFLSKTPGD    60
SASKFLTARN TYYVCKVERG APGTRIENSY KAIVPMLKNP EPELVDSLRT QCDFLERSRI   120
KMLRTLEAKR LAAMESSVNL PARSPKGGGA QQTTSTSSQL KSKGGRSDED GPPSTRRPFY   180
KTRADFLKRH R                                                        191

cDNA Sequence

Download: Fasta

ATGTTTATCA TCATCAAACA TGGAGACAAT CAAGAGTTTC TGGTCAATTC CAATTGCTCT    60
GTCCTCCTGT TGCTACATTA CATCCGAAAG AAAATGAAAT TACGGAAAAC AGACACCATT   120
GATTTGTGTG ATGAATCGGG AACCATGAAG TTACTCTTCC TGTCAAAGAC ACCTGGAGAC   180
TCTGCCAGCA AATTCCTTAC AGCTCGAAAT ACCTACTATG TTTGTAAAGT GGAACGTGGG   240
GCACCAGGTA CCAGAATTGA GAATTCCTAC AAAGCTATTG TGCCCATGCT GAAGAATCCA   300
GAACCTGAAC TAGTTGACTC GCTGCGCACA CAATGTGACT TCCTGGAGAG GAGCAGAATA   360
AAGATGCTTA GAACTCTAGA AGCCAAGAGA CTGGCAGCCA TGGAATCCTC TGTAAATCTC   420
CCAGCAAGGT CTCCCAAGGG TGGTGGAGCC CAGCAGACTA CTAGCACAAG CAGTCAACTG   480
AAGTCTAAAG GTGGGCGATC AGATGAAGAC GGACCACCTT CCACCCGCAG ACCATTCTAC   540
AAGACTAGAG CAGACTTTCT CAAGAGACAT CGTTAA                             576