Sequences for MOUSE63140

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE63140 (Q91WQ9)

E Mus musculus

‹

Orthologs 304

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 24
Gene information
GO Annotations
Sequences/Isoforms 6
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MOUSE63141 reference isoform	153			5	CALL4_MOUSE
	MOUSE63142	106			4	E9Q1L1
	MOUSE63143	139			4	CALL4_MOUSE
	MOUSE63144	76			4	A0A1L1STT7
	MOUSE63145	117			3	ENSMUSG00000032246.1
	MOUSE63140	81			2	Q91WQ9

Protein Sequence

Download: Fasta

MAKFLSQDQI NEYKECFSLY DKQQRGKIKA TDLLVSMRCL GASPTPGEVQ RHLQTHGIDK    60
NGELDFSTFL TIMHMQIKQE DPKKEILLAM LMADKEKKGY IMASELRSKL MKLGEKLTHK   120
EVDDLFKEAG IEPNGQVKYD TFIQRITIPV RDY                                153

cDNA Sequence

Download: Fasta

ATGGCCAAGT TCCTTTCCCA GGACCAAATT AATGAGTACA AGGAGTGCTT CTCCCTGTAC    60
GACAAGCAGC AGAGAGGGAA GATCAAGGCC ACAGATCTTC TGGTGTCCAT GAGGTGCCTA   120
GGGGCCAGCC CCACGCCTGG GGAAGTGCAG CGGCACCTGC AGACTCATGG GATAGACAAG   180
AACGGAGAGC TGGACTTCTC CACCTTCCTG ACCATCATGC ATATGCAAAT CAAGCAAGAG   240
GACCCAAAGA AAGAAATCCT TCTGGCCATG CTGATGGCAG ACAAGGAGAA GAAAGGTTAC   300
ATCATGGCGT CTGAGCTGCG GTCGAAACTC ATGAAACTGG GAGAGAAGCT CACTCACAAG   360
GAAGTGGATG ATCTTTTCAA GGAAGCAGGC ATTGAACCAA ACGGCCAAGT GAAATATGAC   420
ACGTTTATCC AGAGGATCAC CATTCCTGTG CGAGACTACT AA                      462