Sequences for MOUSE62300

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
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HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE62300 (INSY1_MOUSE)

E Mus musculus | Inhibitory synaptic factor 1 [Insyn1]

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Orthologs 163

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MOUSE62299 reference isoform	292			2	INSY1_MOUSE
	MOUSE62300	292			2	INSY1_MOUSE

Protein Sequence

Download: Fasta

MNIRGAPDLG QPSDDPNSGG ERERIRQRMK MVIGQLEGIL RELKEVAKEL REVVSQIDKL    60
TSDFDFELEP DDWTTATVSS TSSSDKAGVG GPFDLGHLDF MTADILSDSW EFCSFLDVST   120
PSDSVDGPEA PRPGTGPDYQ LMNGGLPIPN GPRVETPDSS SEEAFSAGPA KGQVPQRTPG   180
TRERVRFSDK VLYHALCCDD EEGDGEEGEE EEEGDLAPEL PRVEPHTGPL KPSPAPYKTK   240
RSPLTTRRLG PTLAPEQTRR VTRNSSTQTV SDKSTQTVLP YTATKQKAKG KN           292

cDNA Sequence

Download: Fasta

ATGAACATTC GGGGTGCCCC GGACCTCGGG CAGCCCAGTG ACGACCCCAA CAGTGGTGGA    60
GAGAGAGAGC GGATTCGACA GCGCATGAAG ATGGTCATCG GGCAACTTGA AGGCATCCTG   120
AGAGAACTCA AAGAAGTGGC TAAGGAGCTG AGGGAGGTGG TGAGTCAGAT CGACAAGCTA   180
ACCTCTGACT TTGACTTTGA ACTGGAGCCA GATGACTGGA CCACGGCCAC TGTGAGCAGC   240
ACCTCCAGCA GTGACAAGGC AGGTGTGGGC GGCCCCTTTG ACCTGGGCCA CCTGGACTTC   300
ATGACGGCTG ATATCCTCTC AGACAGCTGG GAGTTCTGTT CTTTCCTGGA TGTCTCCACC   360
CCATCAGACT CGGTGGATGG CCCCGAGGCG CCACGGCCAG GCACAGGCCC TGACTACCAG   420
CTCATGAATG GTGGTTTGCC CATCCCCAAC GGGCCACGAG TGGAGACACC AGACTCCTCC   480
AGTGAAGAGG CCTTCAGTGC TGGCCCTGCA AAGGGCCAGG TGCCCCAGCG GACTCCAGGG   540
ACGAGGGAGA GGGTACGGTT CAGTGACAAA GTGCTCTACC ATGCTCTGTG CTGTGACGAT   600
GAAGAGGGGG ATGGTGAGGA GGGAGAGGAG GAGGAGGAGG GGGACCTGGC CCCAGAGCTG   660
CCCCGCGTGG AGCCACACAC AGGCCCCCTC AAGCCCTCCC CAGCCCCCTA CAAGACCAAG   720
CGCTCTCCGT TGACCACCCG ACGCTTGGGC CCCACGTTGG CCCCAGAACA GACCCGGAGG   780
GTCACAAGGA ACAGCAGCAC TCAGACAGTA TCAGACAAGA GCACGCAGAC AGTGCTGCCC   840
TATACGGCCA CCAAACAGAA AGCTAAGGGC AAGAACTAG                          879