Sequences for MOUSE61016

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE61016 (ADX_MOUSE)

E Mus musculus | Adrenodoxin, mitochondrial [Fdx1]

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Orthologs 232

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 6
Gene information
GO Annotations
Sequences/Isoforms 3
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MOUSE61017	59			2	A0A1L1SU91
	MOUSE61018	166			4	A0A1L1STP5
	MOUSE61016 reference isoform	188			4	ADX_MOUSE

Protein Sequence

Download: Fasta

MAAAPGARLL RAACASVPFR GLDRCRLLVC GTGAGTAISP WTPSPRLHAE AGPGRPLSVS    60
ARARSSSEDK ITVHFKNRDG ETLTTKGKIG DSLLDVVIEN NLDIDGFGAC EGTLACSTCH   120
LIFEDHIYEK LDAITDEEND MLDLAFGLTD RSRLGCQVCL TKAMDNMTVR VPEAVADVRQ   180
SVDMSKNS                                                            188

cDNA Sequence

Download: Fasta

ATGGCGGCCG CTCCGGGCGC CCGACTCCTG CGCGCGGCCT GCGCCTCCGT CCCTTTCCGC    60
GGCCTTGACC GCTGTCGGCT GCTGGTCTGC GGGACCGGAG CGGGAACTGC CATCTCTCCG   120
TGGACCCCGA GTCCCCGCCT GCATGCAGAG GCCGGGCCCG GCCGGCCGCT GAGCGTGTCT   180
GCGCGCGCGC GGAGCAGCTC AGAAGATAAG ATAACAGTCC ACTTCAAGAA CCGAGATGGC   240
GAGACGCTAA CGACCAAGGG GAAAATTGGC GACTCTCTGC TAGATGTTGT GATTGAGAAC   300
AACTTAGATA TCGATGGGTT TGGTGCGTGT GAGGGAACGT TGGCTTGCTC TACTTGTCAT   360
CTTATCTTTG AGGATCACAT CTATGAGAAG TTAGATGCCA TTACTGATGA AGAGAATGAC   420
ATGCTTGACC TGGCTTTTGG ACTAACAGAC AGGTCAAGGT TGGGCTGCCA AGTTTGTCTG   480
ACCAAGGCTA TGGACAATAT GACTGTGCGT GTGCCTGAAG CAGTGGCGGA TGTCCGACAG   540
TCTGTTGACA TGAGCAAGAA TTCCTAA                                       567