Sequences for MOUSE54263

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Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE54263 (TM86B_MOUSE)

E Mus musculus | Lysoplasmalogenase TMEM86B [Tmem86b]

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Orthologs 254

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 4
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MOUSE54264	221			2	A0A0U1RNH6
	MOUSE54265	69			1	A0A0U1RNH6
	MOUSE54266	97			2	A0A0U1RP57
	MOUSE54263 reference isoform	226			3	TM86B_MOUSE

Protein Sequence

Download: Fasta

MDARKEGLPL ETLFSDQYPQ VRRWLAPFIL ACSLYFLLWI PVDQPSWVSA LIKCQPILCL    60
VVFLWAVAPG GSSTWLLQGA LVCSAVGDAC LIWPEAFFYG TAAFSVAHLF YLGAFGLTPL   120
QPGLLLCTTL ASLTYYSFLL LHLEQGMVLP VMAYGLILNS MLWRSLVWGG SASWGAVLFT   180
FSDGVLAWDT FVYSLPFARL VTMSTYYAAQ LLLILSALRN PGLKTH                  226

cDNA Sequence

Download: Fasta

ATGGATGCTA GAAAAGAGGG GCTGCCCCTG GAGACACTCT TTTCAGACCA ATACCCACAG    60
GTCCGCAGGT GGCTGGCCCC CTTCATCCTT GCCTGCTCCC TTTACTTCCT CCTCTGGATT   120
CCTGTGGACC AGCCATCTTG GGTCAGTGCC CTGATCAAGT GCCAGCCCAT TCTCTGCCTG   180
GTTGTGTTCC TGTGGGCTGT GGCCCCTGGT GGGAGCAGCA CCTGGCTCCT GCAGGGAGCT   240
CTTGTATGTT CTGCTGTGGG AGATGCCTGC CTCATCTGGC CTGAAGCTTT CTTTTATGGC   300
ACGGCAGCCT TCTCTGTTGC CCACTTATTC TACCTCGGGG CTTTTGGCCT GACCCCACTG   360
CAGCCCGGAT TGCTGCTGTG CACCACCTTG GCCTCTCTGA CATACTACAG CTTCCTCCTG   420
CTACACCTTG AGCAGGGCAT GGTCTTGCCC GTGATGGCCT ATGGGCTGAT CTTGAACTCC   480
ATGCTGTGGC GCAGCCTTGT CTGGGGTGGA AGTGCTAGCT GGGGTGCTGT GCTCTTTACA   540
TTCTCAGATG GTGTGCTGGC CTGGGACACT TTTGTCTACT CTTTACCTTT TGCCCGCCTA   600
GTGACCATGA GCACCTACTA TGCAGCCCAG CTCCTCCTCA TCCTGTCGGC TCTCAGGAAC   660
CCGGGGCTCA AAACCCACTA A                                             681