Sequences for MOUSE50333

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE50333 (D3Z393)

E Mus musculus | Makorin, ring finger protein 2, opposite strand [Mkrn2os]

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Orthologs 248

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 15
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MOUSE50332	76			2	D3YX48
	MOUSE50333 reference isoform	217			4	D3Z393

Protein Sequence

Download: Fasta

MHFEGAGKPL IKFRHCERSI YTFSVPQCCP LCQGDVGSTR IEDAPISISD PFSNGHQEKC    60
AFLLKPTRGT FLREYDGKSD LHVGITNTRG VVYNYSARGI QRDEAGWERS LSVPLVQPSM   120
FGLLDQWDKY LEDFSASLAW LPHRYEENQH NCLTFALAFI NCILAMEGRE QLDKHAFTEK   180
YVIPRTRLAS KYIMLFRAIQ ESGFHVTDHP DPRTSPS                            217

cDNA Sequence

Download: Fasta

ATGCACTTCG AAGGAGCTGG GAAGCCTCTA ATTAAATTCA GGCACTGCGA GAGGTCCATC    60
TACACCTTCA GTGTACCCCA ATGCTGCCCT CTCTGCCAGG GGGACGTGGG CTCCACCAGG   120
ATAGAGGACG CACCTATCAG CATCTCAGAT CCATTCTCCA ACGGTCATCA AGAGAAGTGC   180
GCCTTCCTCC TCAAACCGAC GCGAGGGACG TTCCTTAGGG AGTACGATGG GAAGTCTGAT   240
CTGCACGTTG GAATCACTAA CACACGCGGG GTCGTGTATA ATTACAGTGC ACGCGGCATA   300
CAGCGAGACG AGGCAGGCTG GGAGCGAAGT CTCAGTGTTC CATTAGTACA GCCTAGCATG   360
TTTGGACTGC TGGACCAGTG GGACAAGTAC TTGGAAGACT TCTCTGCTTC GCTGGCCTGG   420
CTGCCTCATA GGTATGAAGA GAATCAGCAC AACTGCCTGA CCTTTGCCCT CGCCTTCATT   480
AACTGCATCC TTGCCATGGA AGGCAGAGAG CAGCTGGACA AGCACGCGTT CACAGAAAAG   540
TACGTGATCC CGAGGACGCG CCTGGCCTCC AAGTACATCA TGCTCTTCAG GGCCATCCAA   600
GAGAGCGGCT TCCACGTGAC TGACCATCCC GACCCACGGA CAAGCCCCTC TTAG         654