Sequences for MOUSE50184

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE50184 (EMC3_MOUSE)

E Mus musculus | ER membrane protein complex subunit 3 [Emc3]

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Orthologs 774

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 73
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MOUSE50184 reference isoform	261			8	EMC3_MOUSE

Protein Sequence

Download: Fasta

MAGPELLLDS NIRLWVVLPI VIITFFVGMI RHYVSILLQS DKKLTQEQVS DSQVLIRSRV    60
LRENGKYIPK QSFLTRKYYF NNPEDGFFKK TKRKVVPPSP MTDPTMLTDM MKGNVTNVLP   120
MILIGGWINM TFSGFVTTKV PFPLTLRFKP MLQQGIELLT LDASWVSSAS WYFLNVFGLR   180
SIYSLILGQD NAADQSRMMQ EQMTGAAMAM PADTNKAFKT EWEALELTDH QWALDDVEEE   240
LMARDLHFEG MFKKELQTSI F                                             261

cDNA Sequence

Download: Fasta

ATGGCGGGGC CCGAGCTGCT GCTTGACTCC AACATCCGCC TCTGGGTGGT CCTGCCCATC    60
GTTATCATCA CTTTCTTCGT GGGCATGATC CGCCACTACG TGTCAATCCT ACTGCAGAGC   120
GACAAGAAGC TCACCCAGGA ACAAGTGTCT GACAGTCAGG TCCTAATTCG AAGCAGAGTC   180
CTCAGGGAAA ATGGAAAATA CATTCCCAAG CAGTCTTTCT TAACACGAAA ATATTACTTC   240
AACAACCCAG AGGATGGATT TTTCAAAAAA ACAAAAAGGA AGGTTGTGCC ACCTTCCCCC   300
ATGACAGACC CCACCATGCT CACAGACATG ATGAAAGGGA ATGTCACAAA TGTCCTCCCA   360
ATGATTCTTA TCGGCGGATG GATCAACATG ACGTTTTCAG GCTTTGTCAC AACTAAGGTC   420
CCGTTTCCAC TGACACTTCG CTTCAAGCCT ATGCTTCAGC AAGGAATAGA GCTGCTCACA   480
CTAGACGCAT CCTGGGTGAG TTCTGCATCC TGGTACTTCC TCAATGTGTT TGGGCTCCGG   540
AGCATTTACT CTCTAATCCT GGGCCAAGAT AACGCCGCCG ACCAGTCACG AATGATGCAG   600
GAGCAGATGA CAGGAGCAGC GATGGCCATG CCTGCAGACA CCAACAAAGC TTTCAAGACA   660
GAGTGGGAAG CTTTGGAACT GACAGATCAC CAGTGGGCGC TCGATGATGT GGAAGAAGAA   720
CTCATGGCCA GAGACCTCCA CTTTGAAGGC ATGTTCAAAA AGGAACTACA GACGTCCATA   780
TTCTAA                                                              786