Sequences for MOUSE44928

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE44928 (LHPL7_MOUSE)

E Mus musculus | LHFPL tetraspan subfamily member 7 protein [Lhfpl7]

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Orthologs 76

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MOUSE44928 reference isoform	195			3	LHPL7_MOUSE

Protein Sequence

Download: Fasta

MEVGVRAALG LSLTGMSGLS LISPAWFQSL SSSYGIFTYC SWPPGDCWNQ SCVTFGSLKD    60
MPSLAWKVSA ATLLGGWLLL SISALLLSAW ALAPRRLFAR TGFGPTPVVQ AAAAVSMLVG   120
LLVFPATLAS PFAKEICEGS SMYHSGACRL SWGYATAILN MVLTSLLVIR WQVTTVQRAA   180
VPFSSETQRA ILVPE                                                    195

cDNA Sequence

Download: Fasta

ATGGAGGTCG GTGTGAGGGC TGCTCTGGGA CTCTCTCTCA CCGGCATGTC TGGCCTCAGC    60
CTCATCTCCC CCGCCTGGTT CCAGAGCCTT TCCTCCTCTT ATGGTATCTT TACCTACTGC   120
TCCTGGCCAC CAGGTGACTG CTGGAACCAA AGCTGTGTGA CCTTTGGGTC ATTGAAGGAC   180
ATGCCCAGCT TGGCCTGGAA GGTCTCAGCT GCAACACTTC TGGGAGGCTG GCTTTTGCTG   240
TCAATCAGCG CTCTTCTCCT CTCAGCCTGG GCACTGGCCC CCCGAAGGTT GTTTGCCAGG   300
ACGGGCTTTG GTCCGACACC GGTGGTGCAG GCGGCAGCAG CAGTCTCCAT GCTTGTAGGT   360
CTGCTGGTTT TTCCAGCCAC TCTGGCTTCC CCATTTGCCA AAGAAATCTG TGAAGGCTCC   420
TCCATGTACC ACAGCGGAGC ATGCCGGCTG AGCTGGGGCT ATGCCACTGC TATCCTCAAC   480
ATGGTCCTGA CCAGCCTGCT TGTCATCAGG TGGCAAGTGA CCACAGTCCA GAGAGCAGCC   540
GTCCCCTTCT CCAGTGAGAC TCAGAGAGCC ATCCTTGTGC CAGAATAA                588