Sequences for MOUSE39578

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE39578 (ANFB_MOUSE)

E Mus musculus | Natriuretic peptides B [Nppb]

‹

Orthologs 54

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 2
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MOUSE39578 reference isoform	121			3	ANFB_MOUSE

Protein Sequence

Download: Fasta

MDLLKVLSQM ILFLLFLYLS PLGGHSYPLG SPSQSPEQFK MQKLLELIRE KSEEMAQRQL    60
LKDQGLTKEH PKRVLRSQGS TLRVQQRPQN SKVTHISSCF GHKIDRIGSV SRLGCNALKL   120
L                                                                   121

cDNA Sequence

Download: Fasta

ATGGATCTCC TGAAGGTGCT GTCCCAGATG ATTCTGTTTC TGCTTTTCCT TTATCTGTCA    60
CCGCTGGGAG GTCACTCCTA TCCTCTGGGA AGTCCTAGCC AGTCTCCAGA GCAATTCAAG   120
ATGCAGAAGC TGCTGGAGCT GATAAGAGAA AAGTCGGAGG AAATGGCCCA GAGACAGCTC   180
TTGAAGGACC AAGGCCTCAC AAAAGAACAC CCAAAAAGAG TCCTTCGGTC TCAAGGCAGC   240
ACCCTCCGGG TCCAGCAGAG ACCTCAAAAT TCCAAGGTGA CACATATCTC AAGCTGCTTT   300
GGGCACAAGA TAGACCGGAT CGGATCCGTC AGTCGTTTGG GCTGTAACGC ACTGAAGTTG   360
TTGTAG                                                              366