Sequences for MOUSE24202

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE24202 (A0A3Q4EII3)

E Mus musculus | COMM domain containing 10 [Commd10]

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Orthologs 289

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 54
Gene information
GO Annotations
Sequences/Isoforms 7
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MOUSE24198 reference isoform	202			7	COMDA_MOUSE
	MOUSE24199	187			6	A0A3Q4EHW7
	MOUSE24200	190			6	Q3UTM6
	MOUSE24201	197			5	A0A3Q4EHG2
	MOUSE24203	113			5	A0A3Q4EGT0
	MOUSE24204	165			6	A0A3Q4EC50
	MOUSE24202	150			6	A0A3Q4EII3

Protein Sequence

Download: Fasta

MAASAALILP ESPSMKKAVP LINAIDTGRF PRLLSRILQK LHLKAESSFS EEEEEKLQAA    60
FSLEKQELHL VLETISFVLE QAVYHNVKPA ALQQQLEMIH LRKDKAEAFA SAWSAMGQET   120
VEKFRQRILG PHKLETVGWQ LNLQMAHSAQ AKLQSPQAVL QLGVSKEDAK NVEKVLVEFN   180
HKELFDFYNK LETIQAQLDS LT                                            202

cDNA Sequence

Download: Fasta

ATGGCGGCGT CCGCAGCGCT GATCCTGCCC GAGAGCCCCA GCATGAAGAA AGCGGTGCCG    60
CTGATAAATG CAATAGACAC GGGGAGATTC CCACGACTTC TCAGCCGGAT TCTTCAAAAG   120
CTCCACCTGA AGGCCGAGAG CAGTTTCAGT GAAGAAGAGG AAGAAAAACT TCAGGCTGCA   180
TTCTCTCTAG AGAAACAAGA ACTTCACCTG GTTCTGGAGA CAATATCATT TGTTTTGGAA   240
CAGGCAGTGT ATCACAACGT GAAGCCAGCA GCACTGCAGC AGCAACTAGA GATGATTCAT   300
CTTAGGAAAG ACAAAGCGGA AGCCTTTGCC AGTGCTTGGT CGGCTATGGG TCAGGAGACA   360
GTTGAGAAGT TCCGCCAGAG AATCCTGGGC CCTCACAAGC TAGAGACAGT GGGATGGCAG   420
CTTAACCTGC AAATGGCCCA CTCTGCTCAA GCAAAGCTGC AGTCTCCCCA GGCCGTGCTG   480
CAACTGGGAG TGAGCAAGGA AGACGCCAAG AACGTGGAGA AAGTTCTCGT GGAATTCAAT   540
CACAAGGAGC TGTTCGATTT CTACAACAAG CTGGAGACCA TACAAGCGCA GCTGGACTCC   600
CTCACATGA                                                           609