Sequences for MONDO28918

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MONDO28918 (A0A5F8GQJ1)

E Monodelphis domestica | Teratocarcinoma-derived growth factor 1 [TDGF1]

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Orthologs 89

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MONDO28918 reference isoform	203			6	A0A5F8GQJ1

Protein Sequence

Download: Fasta

MAWIYHVRRL FLITLVFQVI HLGNGFNEKE KLKGSAEEPI NTTAPKQQPP NQNPTWNSTR    60
DLNRSSESPK QFQSRPFIPF IGFKDGTKLC CQNGGTCVLG SFCVCPMHFV GRHCEHDERK   120
SNCGVFAHGD WVYKGCYLCR CIYGKLHCFR DPTLNNCDLN EEFVTLQSNG SRLQYTLYFL   180
LPFSCFLLQW IVLQKSSSLV PWR                                           203

cDNA Sequence

Download: Fasta

ATGGCCTGGA TCTATCATGT CAGGCGTCTT TTCCTCATCA CTTTGGTCTT CCAGGTCATC    60
CACTTGGGAA ATGGTTTCAA TGAAAAAGAG AAACTCAAAG GCAGTGCAGA AGAACCCATC   120
AATACTACAG CCCCCAAACA ACAGCCCCCA AATCAGAATC CTACTTGGAA CAGCACTAGA   180
GATCTAAACA GGAGTTCTGA GAGCCCCAAA CAGTTCCAGT CCAGGCCATT CATCCCATTT   240
ATTGGATTTA AAGATGGTAC CAAACTCTGC TGTCAAAATG GAGGAACCTG TGTCCTGGGG   300
AGTTTCTGTG TCTGCCCAAT GCATTTTGTT GGGCGGCACT GTGAACATGA TGAACGGAAA   360
AGTAACTGTG GTGTCTTTGC CCATGGAGAT TGGGTATACA AGGGCTGCTA CCTCTGTAGA   420
TGTATCTATG GGAAGCTGCA CTGTTTCAGA GACCCAACAT TAAACAACTG TGATCTGAAT   480
GAAGAATTTG TCACGTTACA ATCTAATGGA TCAAGATTAC AATATACATT ATATTTTCTC   540
CTTCCTTTTT CTTGTTTTCT CCTGCAATGG ATAGTTCTGC AGAAGTCTTC ATCTTTGGTT   600
CCATGGAGGT GA                                                       612