Sequences for MANLE12040

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MANLE12040 (A0A2K5ZP34)

E Mandrillus leucophaeus | Phospholipid phosphatase 5 [PLPP5]

‹

Orthologs 647

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 188
Gene information
GO Annotations
Sequences/Isoforms 3
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MANLE12041	191			6	A0A2K5ZNZ3
	MANLE12042	151			5	A0A2K5ZP26
	MANLE12040 reference isoform	240			6	A0A2K5ZP34

Protein Sequence

Download: Fasta

VTELLPPFQR LIQPEEMWLY RNPYVEAEYF PTKPMFVIAF LSPLSLIFLA KFLKKADTRD    60
SRQACLAASL ALALNGVFTN TIKLIVGRPR PDFFYRCFPD GLAHSDLMCT GDKDVVNEGR   120
KSFPSGHSSF AFAGLAFASF YLAGKLHCFT PQGRGKSWRF CAFLSPLLFA AVIALSRTCD   180
YKHHWQDVLV GSMIGMTFAY VCYRQYYPPL TDAECHKPFQ DKLALPTAQK KPGDSYCFDI   240

cDNA Sequence

Download: Fasta

GTGACGGAGC TGCTCCCCCC GTTCCAGAGA CTCATCCAGC CGGAGGAGAT GTGGCTCTAC    60
CGGAACCCCT ACGTGGAGGC GGAGTATTTC CCCACCAAGC CGATGTTTGT TATTGCATTT   120
CTCTCTCCAC TGTCTCTGAT CTTCCTGGCC AAATTTCTCA AGAAGGCAGA CACAAGAGAC   180
AGCAGACAAG CCTGCCTGGC TGCCAGCCTT GCCCTGGCTC TGAATGGCGT CTTTACCAAC   240
ACAATAAAAC TGATCGTAGG GAGGCCACGC CCAGATTTCT TCTACCGCTG CTTCCCTGAT   300
GGGCTAGCCC ATTCTGACTT GATGTGTACA GGGGATAAGG ACGTGGTGAA TGAGGGCCGA   360
AAGAGCTTCC CCAGCGGACA TTCTTCCTTT GCATTTGCTG GTCTGGCCTT TGCTTCCTTC   420
TACCTGGCAG GGAAGTTACA CTGCTTCACA CCACAAGGCC GTGGGAAATC TTGGAGGTTC   480
TGTGCCTTTC TGTCACCTCT ACTTTTTGCA GCTGTGATTG CACTGTCCCG CACATGTGAC   540
TACAAGCATC ACTGGCAAGA TGTACTAGTT GGATCCATGA TTGGAATGAC ATTTGCCTAT   600
GTCTGCTATC GGCAGTATTA TCCTCCTTTG ACTGATGCAG AATGCCATAA ACCATTTCAA   660
GACAAACTTG CACTTCCAAC TGCACAGAAG AAGCCTGGGG ATTCTTATTG TTTTGATATT   720
TAA                                                                 723