Sequences for MANLE00862

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Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MANLE00862 (A0A2K6A960)

E Mandrillus leucophaeus | Serine rich single-pass membrane protein 1 [SSMEM1]

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Orthologs 75

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MANLE00862 reference isoform	244			3	A0A2K6A960

Protein Sequence

Download: Fasta

MGDLFSLFWE VDPPPIPLNC AIPNQDYECR KDDSCGTIGN FLLWYFVIVF VLMFFSRASV    60
WMSEDKKDEG SGTSTSVRKA SKETSYKWQS KDGAWDPSQT MKKPKQNQLT PVTNSEVALV   120
NAYLEQRRAR RQSQFNEVNQ NQRDSDTTEC GSEESNSEAS SWKESESEHH PSPDSIKRRK   180
MAQRQRNLGS YQMSERHCLR CKAMRTNEWL VHHSQQKASV TPPMKGDSPE ESSISDITTK   240
FSKF                                                                244

cDNA Sequence

Download: Fasta

ATGGGAGACC TTTTTTCCTT ATTTTGGGAG GTAGATCCTC CCCCCATACC TTTAAATTGT    60
GCCATTCCAA ATCAGGATTA TGAATGCCGG AAGGATGACT CTTGTGGGAC CATAGGGAAC   120
TTCCTGCTTT GGTATTTTGT CATTGTATTT GTCCTGATGT TCTTCTCTAG GGCTTCTGTC   180
TGGATGTCTG AGGATAAAAA GGATGAAGGC AGTGGGACAA GTACTTCAGT AAGGAAAGCA   240
AGCAAAGAGA CTTCCTACAA GTGGCAAAGC AAAGACGGTG CCTGGGATCC CTCACAGACA   300
ATGAAGAAAC CAAAGCAGAA CCAACTTACT CCTGTAACCA ACTCAGAAGT GGCTTTGGTC   360
AATGCCTATC TTGAGCAAAG ACGAGCCAGG CGCCAGTCTC AGTTCAATGA GGTGAACCAG   420
AACCAACGTG ACAGTGATAC TACGGAGTGT GGCAGTGAAG AATCTAACTC AGAAGCCTCC   480
TCATGGAAGG AGAGTGAAAG TGAACACCAC CCATCACCAG ACAGTATTAA GAGGAGAAAA   540
ATGGCTCAGA GGCAAAGGAA TCTGGGAAGT TACCAAATGA GTGAAAGGCA CTGCCTGCGC   600
TGCAAAGCCA TGAGAACCAA TGAATGGTTG GTGCACCATT CCCAACAAAA GGCTTCAGTA   660
ACACCGCCAA TGAAAGGAGA CAGTCCAGAG GAAAGTTCCA TATCTGACAT TACCACGAAA   720
TTTAGTAAAT TTTGA                                                    735