Sequences for MACNE16794

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MACNE16794 (A0A2K6E0U7)

E Macaca nemestrina | C-type lectin domain family 1 member B [CLEC1B]

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Orthologs 86

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 1
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	MACNE16793	196			5	A0A2K6E0U3
	MACNE16794 reference isoform	229			6	A0A2K6E0U7

Protein Sequence

Download: Fasta

MQDEDGYVTL NIKTRKPALI SVDPASSSWW RVMALILLIL CVGMVVGLVA LGIWSVMQHN    60
YLQDENENRT GTLQQLAKRF CQYVIKQSEL KGTFKGHKCS PCDTNWRYYG DNCYGFFKHN   120
LTWKESKQYC TDLNATLLKI DNHNILEYIK ARTGLIRWVG LSRQKSNEVW KWEDGSVLSE   180
NMFELLEDGK GNMNCAYFHN GKMHPTFCEN KHYLMCERKA GMTKVDQLP               229

cDNA Sequence

Download: Fasta

ATGCAGGATG AAGATGGATA CGTCACCTTA AATATTAAAA CTCGAAAACC AGCTCTCATC    60
TCTGTTGATC CTGCTTCTTC CTCCTGGTGG CGTGTGATGG CTTTGATTCT GCTGATTCTG   120
TGCGTGGGGA TGGTTGTCGG GCTGGTAGCT CTGGGGATTT GGTCTGTCAT GCAGCACAAC   180
TACCTACAAG ATGAGAATGA AAATCGCACA GGAACTCTGC AACAATTAGC AAAGCGTTTC   240
TGCCAATATG TAATAAAACA ATCAGAACTA AAGGGCACTT TCAAAGGTCA TAAATGCAGC   300
CCCTGTGACA CAAACTGGAG ATACTATGGA GATAACTGCT ATGGGTTCTT CAAGCACAAC   360
TTAACATGGA AAGAGAGTAA GCAGTACTGC ACTGACTTGA ATGCTACTCT ACTGAAGATT   420
GACAACCATA ACATTCTGGA ATACATCAAA GCCAGGACTG GTTTAATTCG TTGGGTCGGA   480
TTATCTCGCC AGAAGTCCAA TGAGGTCTGG AAGTGGGAGG ATGGCTCGGT TCTCTCAGAA   540
AATATGTTTG AGCTTTTGGA AGACGGAAAA GGAAATATGA ACTGTGCTTA TTTTCATAAT   600
GGGAAAATGC ACCCTACCTT CTGTGAAAAC AAACATTATT TAATGTGTGA GAGGAAGGCT   660
GGCATGACCA AGGTTGACCA ACTACCTTAA                                    690