Sequences for JACJA18370

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene JACJA18370 (A0A8C5LG87)

E Jaculus jaculus | Glutathione peroxidase [Gpx3]

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Orthologs 605

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 100
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	JACJA18371	203			4	A0A8C5P5S6
	JACJA18370 reference isoform	225			6	A0A8C5LG87

Protein Sequence

Download: Fasta

MAQLLRASCL LSLLLAGCVP PSRGQEQSKT DCHGGVGGTI YDYGALTIDG EEYIPFKQYS    60
GKYILFVNVA SYGLTDQYIE LNALQEEFAP FGLVILGFPC NQFGKQEPGE NSEILPSLKY   120
VRPGGGFVPN FQLFEKGDVN GAKEQKFYTF LKNSCPPTSE LLGTPSRLFW EPMKVHDIRW   180
NFEKFLVGPD GIPIMRWYHR TTVSNVKMDI LAYMRRKAAQ GATGK                   225

cDNA Sequence

Download: Fasta

ATGGCCCAGC TCCTGCGGGC ATCCTGCCTT CTGTCCCTGC TCCTGGCGGG CTGCGTCCCG    60
CCGAGCCGGG GACAAGAGCA GTCCAAGACG GACTGCCATG GTGGCGTGGG TGGCACCATC   120
TACGATTACG GGGCCCTCAC CATCGACGGC GAGGAGTACA TTCCTTTCAA GCAGTACAGT   180
GGCAAGTACA TCCTCTTCGT CAACGTGGCC AGCTACGGCC TCACAGACCA GTACATAGAG   240
CTGAATGCAC TACAAGAAGA GTTCGCACCA TTTGGTCTGG TCATTCTAGG CTTCCCCTGC   300
AACCAGTTCG GCAAACAGGA GCCAGGAGAG AACTCGGAGA TCCTGCCTAG TCTCAAGTAT   360
GTCCGTCCAG GTGGAGGCTT TGTCCCTAAC TTCCAGCTTT TTGAGAAAGG GGATGTGAAT   420
GGGGCGAAAG AGCAGAAGTT CTACACTTTT CTGAAGAACT CATGCCCACC CACCTCGGAG   480
CTCCTGGGCA CACCCAGCCG TCTCTTCTGG GAACCCATGA AGGTCCATGA CATCCGCTGG   540
AACTTTGAGA AATTCCTGGT GGGGCCAGAT GGCATACCCA TCATGCGCTG GTACCACCGG   600
ACCACTGTCA GCAATGTCAA GATGGACATC CTGGCCTACA TGAGGCGGAA GGCAGCCCAG   660
GGGGCCACTG GGAAGTAA                                                 678