Sequences for JACJA07908

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene JACJA07908 (A0A8C5P449)

E Jaculus jaculus | BCL2 associated agonist of cell death [Bad]

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Orthologs 71

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 2
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	JACJA07908 reference isoform	201			4	A0A8C5P449

Protein Sequence

Download: Fasta

MGTPKKPSLP PTEPQGVRKS EPGIRSLGSD AGGRRWRLAA QSMFQIPEFE PSEQEESSFS    60
ERGLGPSPTG PRQAPGLLGD ISYRQRPQPS NSSHYGGGGA LETRSRHSSY PAGTEEDGGM   120
EEELSPFRGR SRSAPPNLWA AQRYGRELRR MSDEFEGSFK GLPRPKSAGT ATQMRQSSSW   180
TRIIQSWWDR NLGRGGPAPS Q                                             201

cDNA Sequence

Download: Fasta

ATGGGGACTC CAAAGAAGCC ATCACTGCCT CCCACAGAAC CTCAAGGCGT GAGGAAGTCG    60
GAGCCTGGCA TCCGGAGCCT CGGGAGCGAC GCCGGAGGAA GGCGGTGGCG ACTGGCAGCC   120
CAGAGCATGT TCCAGATCCC AGAGTTTGAG CCAAGTGAGC AGGAAGAATC CAGTTTCTCA   180
GAGAGGGGCC TGGGCCCCAG CCCTACGGGC CCCCGACAGG CTCCAGGTCT CTTGGGGGAC   240
ATCAGTTACC GGCAGCGGCC GCAGCCATCG AACAGCAGCC ACTATGGAGG CGGCGGGGCT   300
TTGGAGACCC GGAGTCGCCA CAGTTCGTAC CCTGCGGGAA CCGAAGAGGA TGGAGGCATG   360
GAGGAGGAGC TCAGTCCCTT CCGAGGCCGC TCGCGCTCGG CTCCCCCCAA CCTCTGGGCT   420
GCCCAGCGCT ACGGCCGCGA GCTGCGGAGG ATGAGCGACG AGTTTGAGGG TTCCTTCAAG   480
GGGCTTCCTC GCCCAAAGAG CGCAGGCACG GCGACACAGA TGCGGCAAAG CTCCAGTTGG   540
ACCCGCATCA TCCAGTCCTG GTGGGATCGA AATCTGGGGA GAGGAGGCCC CGCTCCATCC   600
CAGTGA                                                              606