Sequences for ICTTR17425

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ICTTR17425 (I3MZZ8)

E Ictidomys tridecemlineatus | glutathione transferase [HPGDS]

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Orthologs 393

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 2221
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	ICTTR17425 reference isoform	199			5	I3MZZ8

Protein Sequence

Download: Fasta

MPNYKLIYFN MRGRAEIIRY IFAYLDIKYE DHRIEHADWP KIKPTLPFGK IPVLEVDGLT    60
LHQSLAIARY FARNTDLAGK TEMEQCQVDA IADTLDDFMA TFPWAEKNQD VKDQMFNKIL   120
TYDAPHFMQD LDKYLGDKEW LIGNYVTWAD FYWDICSTTL LVLKPDLLDA HPRLLALQKK   180
VQAIPAIADW IQRRPQTKL                                                199

cDNA Sequence

Download: Fasta

ATGCCAAACT ACAAACTGAT TTATTTTAAT ATGAGGGGGA GAGCAGAAAT TATCCGTTAC    60
ATATTTGCTT ATTTGGATAT AAAGTATGAA GATCACAGAA TAGAACATGC TGACTGGCCT   120
AAAATAAAAC CAACTCTTCC ATTTGGTAAA ATCCCTGTTT TGGAAGTGGA TGGTCTTACC   180
CTTCACCAGA GCCTGGCAAT AGCAAGATAC TTTGCCAGAA ACACAGATTT GGCTGGAAAA   240
ACAGAGATGG AACAATGTCA AGTCGATGCT ATTGCAGATA CATTGGATGA TTTCATGGCA   300
ACTTTTCCTT GGGCAGAGAA AAACCAAGAT GTAAAAGATC AGATGTTTAA TAAGATTCTC   360
ACGTATGATG CACCTCATTT TATGCAAGAT TTGGACAAAT ATTTAGGGGA CAAAGAGTGG   420
CTTATTGGTA ACTATGTAAC TTGGGCAGAT TTCTACTGGG ACATTTGCAG TACTACACTT   480
TTGGTCCTCA AACCTGACTT GTTGGACGCC CATCCCAGGC TATTGGCATT GCAGAAGAAA   540
GTCCAAGCCA TTCCTGCCAT TGCAGACTGG ATCCAAAGGA GGCCCCAAAC CAAACTCNNN   600