Sequences for HUMAN93935

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN93935 (CHCH7_HUMAN)

E Homo sapiens | Coiled-coil-helix-coiled-coil-helix domain-contain [CHCHD7]

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Orthologs 237

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 2
Gene information
GO Annotations
Sequences/Isoforms 14
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN93928	56			2	Q9BUK0
	HUMAN93929	110			4	CHCH7_HUMAN
	HUMAN93930	44			2	E5RJ08
	HUMAN93931	60			2	E5RFN2
	HUMAN93932	65			3	E5RJ15
	HUMAN93933	65			3	E5RJ15
	HUMAN93934	61			4	E5RII1
	HUMAN93936	68			3	CHCH7_HUMAN
	HUMAN93937	97			4	CHCH7_HUMAN
	HUMAN93938	94			4	CHCH7_HUMAN
	HUMAN93939	46			3	E5RHM5
	HUMAN93940	68			3	CHCH7_HUMAN
	HUMAN93941	56			2	Q9BUK0
	HUMAN93935 reference isoform	85			3	CHCH7_HUMAN

Protein Sequence

Download: Fasta

MPSVTQRLRD PDINPCLSES DASTRCLDEN NYDRERCSTY FLRYKNCRRF WNSIVMQRRK    60
NGVKPFMPTA AERDEILRAV GNMPY                                          85

cDNA Sequence

Download: Fasta

ATGCCCTCGG TAACACAGAG GCTGAGAGAT CCTGACATAA ATCCTTGTTT GTCGGAATCT    60
GATGCTTCCA CCAGATGTCT GGATGAAAAT AACTATGACA GGGAAAGGTG TTCCACTTAC   120
TTCTTGAGGT ACAAAAACTG CCGGAGATTC TGGAATTCTA TCGTGATGCA GAGAAGAAAG   180
AACGGAGTGA AGCCATTTAT GCCTACGGCA GCAGAAAGAG ATGAAATCTT GAGAGCAGTG   240
GGAAATATGC CCTATTGA                                                 258