Sequences for HUMAN82713

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN82713 (LTC4S_HUMAN)

E Homo sapiens | Leukotriene C4 synthase [LTC4S]

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Orthologs 172

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 22
Gene information
GO Annotations
Sequences/Isoforms 4
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN82712	69			3	D6RJA1
	HUMAN82714	93			3	B5MCC3
	HUMAN82715	104			4	A0A286YF10
	HUMAN82713 reference isoform	150			5	LTC4S_HUMAN

Protein Sequence

Download: Fasta

MKDEVALLAA VTLLGVLLQA YFSLQVISAR RAFRVSPPLT TGPPEFERVY RAQVNCSEYF    60
PLFLATLWVA GIFFHEGAAA LCGLVYLFAR LRYFQGYARS AQLRLAPLYA SARALWLLVA   120
LAALGLLAHF LPAALRAALL GRLRTLLPWA                                    150

cDNA Sequence

Download: Fasta

ATGAAGGACG AGGTAGCTCT ACTGGCTGCT GTCACCCTCC TGGGAGTCCT GCTGCAAGCC    60
TACTTCTCCC TGCAGGTGAT CTCGGCGCGC AGGGCCTTCC GCGTGTCGCC GCCGCTCACC   120
ACCGGCCCAC CCGAGTTCGA GCGCGTCTAC CGAGCCCAGG TGAACTGCAG CGAGTACTTC   180
CCGCTGTTCC TCGCCACGCT CTGGGTCGCC GGCATCTTCT TTCATGAAGG GGCGGCGGCC   240
CTGTGCGGCC TGGTCTACCT GTTCGCGCGC CTCCGCTACT TCCAGGGCTA CGCGCGCTCC   300
GCGCAGCTCA GGCTGGCACC GCTGTACGCG AGCGCGCGCG CCCTCTGGCT GCTGGTGGCG   360
CTGGCTGCGC TCGGCCTGCT CGCCCACTTC CTCCCGGCCG CGCTGCGCGC CGCGCTCCTC   420
GGACGGCTCC GGACGCTGCT GCCGTGGGCC TGA                                453