Sequences for HUMAN80799

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN80799 (C2AIL_HUMAN)

E Homo sapiens | CDKN2AIP N-terminal-like protein [CDKN2AIPNL]

‹

Orthologs 139

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 20
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN80800	85			2	C2AIL_HUMAN
	HUMAN80799 reference isoform	116			3	C2AIL_HUMAN

Protein Sequence

Download: Fasta

MVGGEAAAAV EELVSGVRQA ADFAEQFRSY SESEKQWKAR MEFILRHLPD YRDPPDGSGR    60
LDQLLSLSMV WANHLFLGCS YNKDLLDKVM EMADGIEVED LPQFTTRSEL MKKHQS       116

cDNA Sequence

Download: Fasta

ATGGTCGGTG GCGAGGCGGC TGCCGCAGTG GAGGAGCTGG TTTCGGGGGT GCGGCAGGCG    60
GCCGACTTCG CGGAGCAGTT CCGCTCCTAC TCAGAGAGCG AGAAGCAATG GAAGGCCCGC   120
ATGGAATTCA TCCTGCGCCA CCTGCCCGAC TACCGCGACC CGCCCGACGG CAGTGGCCGC   180
CTGGACCAGC TGCTCTCCCT CTCCATGGTC TGGGCCAACC ATCTCTTCCT AGGCTGCAGT   240
TACAATAAAG ACCTTTTAGA CAAGGTGATG GAAATGGCCG ATGGGATTGA AGTGGAAGAC   300
CTGCCACAAT TTACTACCAG AAGTGAATTA ATGAAAAAGC ATCAAAGCTA A            351