Sequences for HUMAN78232

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN78232 (P32321)

E Homo sapiens | dCMP deaminase [DCTD]

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Orthologs 1152

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 89
Gene information
GO Annotations
Sequences/Isoforms 16
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN78229	41			2	D6RD72
	HUMAN78230	189			6	DCTD_HUMAN
	HUMAN78231	44			2	D6R9P0
	HUMAN78233	41			2	D6RD72
	HUMAN78234	178			5	P32321
	HUMAN78235	169			5	D6R9S0
	HUMAN78236	120			3	D6R9S0
	HUMAN78237	119			3	D6R9S0
	HUMAN78238	98			3	D6RAD7
	HUMAN78239	17			2	D6RIG3
	HUMAN78240	73			2	D6RAD7
	HUMAN78241	44			2	D6R9P0
	HUMAN78242	44			2	D6R9P0
	HUMAN78243	59			2	D6RAD7
	HUMAN78244	23			1	D6RJA9
	HUMAN78232 reference isoform	178			5	P32321

Protein Sequence

Download: Fasta

MSEVSCKKRD DYLEWPEYFM AVAFLSAQRS KDPNSQVGAC IVNSENKIVG IGYNGMPNGC    60
SDDVLPWRRT AENKLDTKYP YVCHAELNAI MNKNSTDVKG CSMYVALFPC NECAKLIIQA   120
GIKEVIFMSD KYHDSDEATA ARLLFNMAGV TFRKFIPKCS KIVIDFDSIN SRPSQKLQ     178

cDNA Sequence

Download: Fasta

ATGAGTGAAG TTTCCTGCAA GAAACGGGAC GACTATTTGG AATGGCCAGA GTATTTTATG    60
GCTGTGGCCT TCTTATCAGC ACAGAGAAGC AAAGATCCAA ATTCCCAGGT CGGCGCCTGC   120
ATCGTGAATT CAGAAAACAA GATTGTCGGG ATTGGGTACA ATGGGATGCC AAATGGGTGC   180
AGTGATGACG TGTTGCCTTG GAGAAGGACA GCAGAGAATA AGCTGGACAC CAAATACCCG   240
TACGTGTGCC ATGCGGAGCT GAATGCCATC ATGAACAAAA ATTCGACCGA TGTGAAAGGC   300
TGTAGTATGT ATGTTGCCTT GTTCCCTTGT AATGAATGCG CTAAGCTCAT CATCCAGGCA   360
GGTATAAAAG AAGTGATTTT CATGTCTGAT AAATACCATG ATAGTGACGA GGCAACTGCT   420
GCGAGGCTCC TGTTTAATAT GGCCGGGGTG ACATTCCGGA AATTCATACC GAAGTGCAGC   480
AAGATTGTCA TTGACTTTGA TTCAATTAAC AGCAGACCGA GTCAAAAGCT TCAGTGA      537