Sequences for HUMAN73424

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN73424 (TNF10_HUMAN)

E Homo sapiens | Tumor necrosis factor ligand superfamily member 10 [TNFSF10]

‹

Orthologs 200

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 3
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN73423 reference isoform	281			5	TNF10_HUMAN
	HUMAN73425	74			3	H7C246
	HUMAN73424	101			3	TNF10_HUMAN

Protein Sequence

Download: Fasta

MAMMEVQGGP SLGQTCVLIV IFTVLLQSLC VAVTYVYFTN ELKQMQDKYS KSGIACFLKE    60
DDSYWDPNDE ESMNSPCWQV KWQLRQLVRK MILRTSEETI STVQEKQQNI SPLVRERGPQ   120
RVAAHITGTR GRSNTLSSPN SKNEKALGRK INSWESSRSG HSFLSNLHLR NGELVIHEKG   180
FYYIYSQTYF RFQEEIKENT KNDKQMVQYI YKYTSYPDPI LLMKSARNSC WSKDAEYGLY   240
SIYQGGIFEL KENDRIFVSV TNEHLIDMDH EASFFGAFLV G                       281

cDNA Sequence

Download: Fasta

ATGGCTATGA TGGAGGTCCA GGGGGGACCC AGCCTGGGAC AGACCTGCGT GCTGATCGTG    60
ATCTTCACAG TGCTCCTGCA GTCTCTCTGT GTGGCTGTAA CTTACGTGTA CTTTACCAAC   120
GAGCTGAAGC AGATGCAGGA CAAGTACTCC AAAAGTGGCA TTGCTTGTTT CTTAAAAGAA   180
GATGACAGTT ATTGGGACCC CAATGACGAA GAGAGTATGA ACAGCCCCTG CTGGCAAGTC   240
AAGTGGCAAC TCCGTCAGCT CGTTAGAAAG ATGATTTTGA GAACCTCTGA GGAAACCATT   300
TCTACAGTTC AAGAAAAGCA ACAAAATATT TCTCCCCTAG TGAGAGAAAG AGGTCCTCAG   360
AGAGTAGCAG CTCACATAAC TGGGACCAGA GGAAGAAGCA ACACATTGTC TTCTCCAAAC   420
TCCAAGAATG AAAAGGCTCT GGGCCGCAAA ATAAACTCCT GGGAATCATC AAGGAGTGGG   480
CATTCATTCC TGAGCAACTT GCACTTGAGG AATGGTGAAC TGGTCATCCA TGAAAAAGGG   540
TTTTACTACA TCTATTCCCA AACATACTTT CGATTTCAGG AGGAAATAAA AGAAAACACA   600
AAGAACGACA AACAAATGGT CCAATATATT TACAAATACA CAAGTTATCC TGACCCTATA   660
TTGTTGATGA AAAGTGCTAG AAATAGTTGT TGGTCTAAAG ATGCAGAATA TGGACTCTAT   720
TCCATCTATC AAGGGGGAAT ATTTGAGCTT AAGGAAAATG ACAGAATTTT TGTTTCTGTA   780
ACAAATGAGC ACTTGATAGA CATGGACCAT GAAGCCAGTT TTTTTGGGGC CTTTTTAGTT   840
GGCTAA                                                              846