Sequences for HUMAN61297

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN61297 (PPAC_HUMAN)

E Homo sapiens | Low molecular weight phosphotyrosine protein phosp [ACP1]

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Orthologs 1673

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 310
Gene information
GO Annotations
Sequences/Isoforms 9
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN61298	80			4	G5E9R5
	HUMAN61299	112			3	PPAC_HUMAN
	HUMAN61300	46			3	F2Z2R9
	HUMAN61301	85			3	D3YTI2
	HUMAN61302	46			3	F2Z2R9
	HUMAN61303	70			4	F2Z2Q9
	HUMAN61304	158			6	PPAC_HUMAN
	HUMAN61305	70			4	F2Z2Q9
	HUMAN61297 reference isoform	158			6	PPAC_HUMAN

Protein Sequence

Download: Fasta

MAEQATKSVL FVCLGNICRS PIAEAVFRKL VTDQNISENW VIDSGAVSDW NVGRSPDPRA    60
VSCLRNHGIH TAHKARQITK EDFATFDYIL CMDESNLRDL NRKSNQVKTC KAKIELLGSY   120
DPQKQLIIED PYYGNDSDFE TVYQQCVRCC RAFLEKAH                           158

cDNA Sequence

Download: Fasta

ATGGCGGAAC AGGCTACCAA GTCCGTGCTG TTTGTGTGTC TGGGTAACAT TTGTCGATCA    60
CCCATTGCAG AAGCAGTTTT CAGGAAACTT GTAACCGATC AAAACATCTC AGAGAATTGG   120
GTCATTGACA GCGGTGCTGT TTCTGACTGG AACGTGGGCC GGTCCCCAGA CCCAAGAGCT   180
GTGAGCTGCC TAAGAAATCA TGGCATTCAC ACAGCCCATA AAGCAAGACA GATTACCAAA   240
GAAGATTTTG CCACATTTGA TTATATACTA TGTATGGATG AAAGCAATCT GAGAGATTTG   300
AATAGAAAAA GTAATCAAGT TAAAACCTGC AAAGCTAAAA TTGAACTACT TGGGAGCTAT   360
GATCCACAAA AACAACTTAT TATTGAAGAT CCCTATTATG GGAATGACTC TGACTTTGAG   420
ACGGTGTACC AGCAGTGTGT CAGGTGCTGC AGAGCGTTCT TGGAGAAGGC CCACTGA      477