Sequences for HUMAN54489

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN54489 (IL24_HUMAN)

E Homo sapiens | Interleukin-24 [IL24]

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Orthologs 74

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 1
Gene information
GO Annotations
Sequences/Isoforms 6
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN54487	207			6	IL24_HUMAN
	HUMAN54488 reference isoform	206			6	IL24_HUMAN
	HUMAN54490	154			5	IL24_HUMAN
	HUMAN54491	51			3	E7ER64
	HUMAN54492	60			3	E7ETP6
	HUMAN54489	63			4	IL24_HUMAN

Protein Sequence

Download: Fasta

MNFQQRLQSL WTLARPFCPP LLATASQMQM VVLPCLGFTL LLWSQVSGAQ GQEFHFGPCQ    60
VKGVVPQKLW EAFWAVKDTM QAQDNITSAR LLQQEVLQNV SDAESCYLVH TLLEFYLKTV   120
FKNYHNRTVE VRTLKSFSTL ANNFVLIVSQ LQPSQENEMF SIRDSAHRRF LLFRRAFKQL   180
DVEAALTKAL GEVDILLTWM QKFYKL                                        206

cDNA Sequence

Download: Fasta

ATGAATTTTC AACAGAGGCT GCAAAGCCTG TGGACTTTAG CCAGACCCTT CTGCCCTCCT    60
TTGCTGGCGA CAGCCTCTCA AATGCAGATG GTTGTGCTCC CTTGCCTGGG TTTTACCCTG   120
CTTCTCTGGA GCCAGGTATC AGGGGCCCAG GGCCAAGAAT TCCACTTTGG GCCCTGCCAA   180
GTGAAGGGGG TTGTTCCCCA GAAACTGTGG GAAGCCTTCT GGGCTGTGAA AGACACTATG   240
CAAGCTCAGG ATAACATCAC GAGTGCCCGG CTGCTGCAGC AGGAGGTTCT GCAGAACGTC   300
TCGGATGCTG AGAGCTGTTA CCTTGTCCAC ACCCTGCTGG AGTTCTACTT GAAAACTGTT   360
TTCAAAAACT ACCACAATAG AACAGTTGAA GTCAGGACTC TGAAGTCATT CTCTACTCTG   420
GCCAACAACT TTGTTCTCAT CGTGTCACAA CTGCAACCCA GTCAAGAAAA TGAGATGTTT   480
TCCATCAGAG ACAGTGCACA CAGGCGGTTT CTGCTATTCC GGAGAGCATT CAAACAGTTG   540
GACGTAGAAG CAGCTCTGAC CAAAGCCCTT GGGGAAGTGG ACATTCTTCT GACCTGGATG   600
CAGAAATTCT ACAAGCTCTG A                                             621