Sequences for HUMAN46202

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN46202 (RL28_HUMAN)

E Homo sapiens | Large ribosomal subunit protein eL28 [RPL28]

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Orthologs 780

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 342
Gene information
GO Annotations
Sequences/Isoforms 9
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN46196	87			2	RL28_HUMAN
	HUMAN46197	69			3	RL28_HUMAN
	HUMAN46198	169			4	RL28_HUMAN
	HUMAN46199 reference isoform	137			4	RL28_HUMAN
	HUMAN46200	163			3	RL28_HUMAN
	HUMAN46201	170			4	H0YKD8
	HUMAN46203	89			3	H0YLP6
	HUMAN46204	112			3	H0YMF4
	HUMAN46202	137			4	RL28_HUMAN

Protein Sequence

Download: Fasta

MSAHLQWMVV RNCSSFLIKR NKQTYSTEPN NLKARNSFRY NGLIHRKTVG VEPAADGKGV    60
VVVIKRRSGQ RKPATSYVRT TINKNARATL SSIRHMIRKN KYRPDLRMAA IRRASAILRS   120
QKPVMVKRKR TRPTKSS                                                  137

cDNA Sequence

Download: Fasta

ATGTCTGCGC ATCTGCAATG GATGGTCGTG CGGAACTGCT CCAGTTTCCT GATCAAGAGG    60
AATAAGCAGA CCTACAGCAC TGAGCCCAAT AACTTGAAGG CCCGCAATTC CTTCCGCTAC   120
AACGGACTGA TTCACCGCAA GACTGTGGGC GTGGAGCCGG CAGCCGACGG CAAAGGTGTC   180
GTGGTGGTCA TTAAGCGGAG ATCCGGCCAG CGGAAGCCTG CCACCTCCTA TGTGCGGACC   240
ACCATCAACA AGAATGCTCG CGCCACGCTC AGCAGCATCA GACACATGAT CCGCAAGAAC   300
AAGTACCGCC CCGACCTGCG CATGGCAGCC ATCCGCAGGG CCAGCGCCAT CCTGCGCAGC   360
CAGAAGCCTG TGATGGTGAA GAGGAAGCGG ACCCGCCCCA CCAAGAGCTC CTGA         414