Sequences for HUMAN42916

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN42916 (TBCB_HUMAN)

E Homo sapiens | Tubulin-folding cofactor B [TBCB]

‹

Orthologs 733

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 14
Gene information
GO Annotations
Sequences/Isoforms 9
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN42909	45			2	K7EQH0
	HUMAN42910 reference isoform	244			6	TBCB_HUMAN
	HUMAN42911	282			7	A0A494C0X0
	HUMAN42912	191			6	K7EK42
	HUMAN42913	133			4	K7EL99
	HUMAN42914	169			5	K7EP07
	HUMAN42915	45			2	K7EQH0
	HUMAN42917	60			3	K7ER04
	HUMAN42916	193			5	TBCB_HUMAN

Protein Sequence

Download: Fasta

MEVTGVSAPT VTVFISSSLN TFRSEKRYSR SLTIAEFKCK LELLVGSPAS CMELELYGVD    60
DKFYSKLDQE DALLGSYPVD DGCRIHVIDH SGARLGEYED VSRVEKYTIS QEAYDQRQDT   120
VRSFLKRSKL GRYNEEERAQ QEAEAAQRLA EEKAQASSIP VGSRCEVRAA GQSPRRGTVM   180
YVGLTDFKPG YWIGVRYDEP LGKNDGSVNG KRYFECQAKY GAFVKPAVVT VGDFPEEDYG   240
LDEI                                                                244

cDNA Sequence

Download: Fasta

ATGGAGGTGA CGGGGGTGTC GGCACCCACG GTGACCGTTT TCATCAGCAG CTCCCTCAAC    60
ACCTTCCGCT CCGAGAAGCG ATACAGCCGC AGCCTCACCA TCGCTGAGTT CAAGTGTAAA   120
CTGGAGTTGC TGGTGGGCAG CCCTGCTTCC TGCATGGAAC TGGAGCTGTA TGGAGTTGAC   180
GACAAGTTCT ACAGCAAGCT GGATCAAGAG GATGCGCTCC TGGGCTCCTA CCCTGTAGAT   240
GACGGCTGCC GCATCCACGT CATTGACCAC AGTGGCGCCC GCCTTGGTGA GTATGAGGAC   300
GTGTCCCGGG TGGAGAAGTA CACGATCTCA CAAGAAGCCT ACGACCAGAG GCAAGACACG   360
GTCCGCTCTT TCCTGAAGCG CAGCAAGCTC GGCCGGTACA ACGAGGAGGA GCGGGCTCAG   420
CAGGAGGCCG AGGCCGCCCA GCGCCTGGCC GAGGAGAAGG CCCAGGCCAG CTCCATCCCC   480
GTGGGCAGCC GCTGTGAGGT GCGGGCGGCG GGACAATCCC CTCGCCGGGG CACCGTCATG   540
TATGTAGGTC TCACAGATTT CAAGCCTGGC TACTGGATTG GTGTCCGCTA TGATGAGCCA   600
CTGGGGAAAA ATGATGGCAG TGTGAATGGG AAACGCTACT TCGAATGCCA GGCCAAGTAT   660
GGCGCCTTTG TCAAGCCAGC AGTCGTGACG GTGGGGGACT TCCCGGAGGA GGACTACGGG   720
TTGGACGAGA TATGA                                                    735